Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2058 |
Symbol | metX |
ID | 5206095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2566442 |
End bp | 2567710 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640600298 |
Product | homoserine O-acetyltransferase |
Protein accession | YP_001280948 |
Protein GI | 148653855 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2021] Homoserine acetyltransferase |
TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000028902 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTATCC AATCGACTGC GACAGATCCA AAACTTGCCA ACTCTGTGGG TATCGTAACC CCGCAGACCA TGCATTTTGA TACCCCGTTG ACCTTAGAGT GTCACCGTAC TTTGCCTGAG TTTGATTTGG TTTATGAAAC CTATGGCCAA TTAAATGACC AAAAATCCAA TGCGGTGCTG ATTTGCCATG CGTTATCCGG CAGTCATCAT GCGGCCGGTT ATCACAGCGA AGAGGACGTA AAGCCCGGCT GGTGGGACAA TATGATTGGC CCTGGTAAAG CCATTGATAC CACAAGATTT TTTGTCGTAT GCCTCAATAA TATTGGCAGC TGTCATGGCT CAACTGGTCC CACAACTCCC ATTCCACAAT CAAGCTCTGA GGGTACGCCT GGCACCCCTT ATGGCCCTGA CTTCCCTTTG ATTACCATTA AGGACTGGGT ACGCACACAG GCCATGCTGT CTGACCGCTT AGGCATTGAT ACTTGGCACG CTGTAGTCGG TGGCTCAATG GGGGGTATGC AAGCACTACA ATGGTCGGTC GATTATCCTG ATCGCTTAAG ACGCTGCGTT ATTATTGCCA GTACCCCTAA GCTGTCTGCT CAAAACATTG CCTTTAATGA GGTCGCCCGC CAGTCTATCT TATCAGACCC TGACTTTAAT CAAGGCCGTT ATTTAGAGGC CGGCACTTAT CCTCGCCGCG GCCTAATTTT GGCACGTATG GTAGGCCACA TCACCTACTT GACTGAAGAG GCGATGAAGT CCAAATTCGG CCGTGACTTA AAGTCTGGCA AATTTATGTA CGGTTATGAT GTGGAATTTC AGGTTGAGAG CTACTTGCGC TATCAAGGTG AGCGCTTTAG CAAAAACTTC GATGCCAATA CCTATCTATT AATGACCAAA GCACTAGATT ATTTTGATCC GACTCGCGGT TATGTCAGCG ATGAGAGCTT ATCAGACTTA GAAGCTCTAA AGCAGACTTT AAAGCACACC CGTTGCCAGT TTTTAATTGT GTCATTTACC ACAGATTGGC GCTTTGCTCC CGCCCGCTCT GAAGAAATCG TGGACGCCTT AATGGCCAAT GACAAGCCGG TCAGCTATGT CAATGTCGAT GCACCGCACG GCCATGACTC CTTCTTATTT GATATCCCGC GTTATATGGG TGCCATTAGA GGGTTTTTAA ACTCACCTTT TTTGGGTGCT CACTCAAACA CCGACTCTGC CAAACCTGCG GCTACCACTA AGCCCCACAC CCAGGAGCGC TTAACATGA
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Protein sequence | MSIQSTATDP KLANSVGIVT PQTMHFDTPL TLECHRTLPE FDLVYETYGQ LNDQKSNAVL ICHALSGSHH AAGYHSEEDV KPGWWDNMIG PGKAIDTTRF FVVCLNNIGS CHGSTGPTTP IPQSSSEGTP GTPYGPDFPL ITIKDWVRTQ AMLSDRLGID TWHAVVGGSM GGMQALQWSV DYPDRLRRCV IIASTPKLSA QNIAFNEVAR QSILSDPDFN QGRYLEAGTY PRRGLILARM VGHITYLTEE AMKSKFGRDL KSGKFMYGYD VEFQVESYLR YQGERFSKNF DANTYLLMTK ALDYFDPTRG YVSDESLSDL EALKQTLKHT RCQFLIVSFT TDWRFAPARS EEIVDALMAN DKPVSYVNVD APHGHDSFLF DIPRYMGAIR GFLNSPFLGA HSNTDSAKPA ATTKPHTQER LT
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