Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2044 |
Symbol | |
ID | 5204612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2548606 |
End bp | 2549823 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640600284 |
Product | FHA domain-containing protein |
Protein accession | YP_001280934 |
Protein GI | 148653841 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000130358 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAATT ATAACAACAC AAACCAAACG CAGTGGCAAC TGACCGCCTT AACCGAAGCT TTGGGTAATC TAGAGCTCAA CGTAGACCAT AAGTTAACCG TTGGTCGTGG TCAAGACAAT GATGTGGTAC TAGGCAGCAA GCAGGTCTCT CGACAACATG CTGAGCTAAC TGTCGTTGAT GATGAGCTAC TGGTACAAGA TTTAGGGTCA TCAAATGGTA CTTTGGTCAA TGACGTCAGA CTTGAGCCGC ATCAGCCAAA AAGCTTGGTG GTAGATGATG TGGTTACTTT CGCCGCTTTT AGCTTCCAAG TAAAACAAAC TCAGCCACTA GACTCAGCGG CGGTATCATC ACTTGAGCCT GAAGTTGAAA CCATTGAGCC TGAAGTTGAA ACTATTGAGC CTGAAGTTGA AACTATTGAG CCTGAAGTTG AAACTATTGA GCCTGAAGTT GAAACTATTG AGCCAGAAAT TGAGACGGTA GAACCCGAAG CCATCGAGCC TGAAGTTGAG ACGGTAGAAC CTGAAGTCAT CGAGCCACAA ACGGTCGAGC CTATAGAAAC TGCAGAAATA GTAGAAGCGC CAGCGACTCA TCCAGTAGAG CCGTTAGCTG AGCCTATCAC ACCTACTGCG CAACCAGAAA AAACCGACAG TGAATTTGAT AAATTTGAAG CCGCTGAGAG GGCAGAGCAC CAGGCTGAAG AAAACGCAGA AGCTATTGAA AAATCGGGTA TTAAAAACAT GACCGAAGCT GAGCTTGAAC AAAAGCTAGA AGAAGAGCTT GAGCAGCCTA CCGGTGTTTA TAACTCAGAG CAAAACCATC TGCATAAAGA TGACGCTGAG CACTTTGCAG AGTTGGCTCG TGAGGCAGAT CCTGAAGTGC ATAAATCCAA ACAAGCAGCA GCTGCCCAGA TGTCAGCCAC CACCAATTTA CATGACACCG TAGAGCCAGA CACTAAAAAA CCGGTCAAAG AGCTGACAGG CGATGCAGAA AATGAGATAA ATACCCAAAC TCAGGCTCCC GTATCTGAAA AAAATCCAGC CAACAGCTTT AATACGGTGA ATGAGCAGCC GCAGCACAAG GTGGCACACA TTCATAAAAC GGATTCTGCA CCACAAAATG CAAATTCTGG ATCAAACAAA GGCTTTTTGT GGATGGCCTT GATTTTATTG GTCTTAGCCG TAGCTTTATG GCTTTATAAC AGTGGCACAT TGGCCTAA
|
Protein sequence | MSNYNNTNQT QWQLTALTEA LGNLELNVDH KLTVGRGQDN DVVLGSKQVS RQHAELTVVD DELLVQDLGS SNGTLVNDVR LEPHQPKSLV VDDVVTFAAF SFQVKQTQPL DSAAVSSLEP EVETIEPEVE TIEPEVETIE PEVETIEPEV ETIEPEIETV EPEAIEPEVE TVEPEVIEPQ TVEPIETAEI VEAPATHPVE PLAEPITPTA QPEKTDSEFD KFEAAERAEH QAEENAEAIE KSGIKNMTEA ELEQKLEEEL EQPTGVYNSE QNHLHKDDAE HFAELAREAD PEVHKSKQAA AAQMSATTNL HDTVEPDTKK PVKELTGDAE NEINTQTQAP VSEKNPANSF NTVNEQPQHK VAHIHKTDSA PQNANSGSNK GFLWMALILL VLAVALWLYN SGTLA
|
| |