Gene PsycPRwf_2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2044 
Symbol 
ID5204612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2548606 
End bp2549823 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content45% 
IMG OID640600284 
ProductFHA domain-containing protein 
Protein accessionYP_001280934 
Protein GI148653841 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000130358 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATT ATAACAACAC AAACCAAACG CAGTGGCAAC TGACCGCCTT AACCGAAGCT 
TTGGGTAATC TAGAGCTCAA CGTAGACCAT AAGTTAACCG TTGGTCGTGG TCAAGACAAT
GATGTGGTAC TAGGCAGCAA GCAGGTCTCT CGACAACATG CTGAGCTAAC TGTCGTTGAT
GATGAGCTAC TGGTACAAGA TTTAGGGTCA TCAAATGGTA CTTTGGTCAA TGACGTCAGA
CTTGAGCCGC ATCAGCCAAA AAGCTTGGTG GTAGATGATG TGGTTACTTT CGCCGCTTTT
AGCTTCCAAG TAAAACAAAC TCAGCCACTA GACTCAGCGG CGGTATCATC ACTTGAGCCT
GAAGTTGAAA CCATTGAGCC TGAAGTTGAA ACTATTGAGC CTGAAGTTGA AACTATTGAG
CCTGAAGTTG AAACTATTGA GCCTGAAGTT GAAACTATTG AGCCAGAAAT TGAGACGGTA
GAACCCGAAG CCATCGAGCC TGAAGTTGAG ACGGTAGAAC CTGAAGTCAT CGAGCCACAA
ACGGTCGAGC CTATAGAAAC TGCAGAAATA GTAGAAGCGC CAGCGACTCA TCCAGTAGAG
CCGTTAGCTG AGCCTATCAC ACCTACTGCG CAACCAGAAA AAACCGACAG TGAATTTGAT
AAATTTGAAG CCGCTGAGAG GGCAGAGCAC CAGGCTGAAG AAAACGCAGA AGCTATTGAA
AAATCGGGTA TTAAAAACAT GACCGAAGCT GAGCTTGAAC AAAAGCTAGA AGAAGAGCTT
GAGCAGCCTA CCGGTGTTTA TAACTCAGAG CAAAACCATC TGCATAAAGA TGACGCTGAG
CACTTTGCAG AGTTGGCTCG TGAGGCAGAT CCTGAAGTGC ATAAATCCAA ACAAGCAGCA
GCTGCCCAGA TGTCAGCCAC CACCAATTTA CATGACACCG TAGAGCCAGA CACTAAAAAA
CCGGTCAAAG AGCTGACAGG CGATGCAGAA AATGAGATAA ATACCCAAAC TCAGGCTCCC
GTATCTGAAA AAAATCCAGC CAACAGCTTT AATACGGTGA ATGAGCAGCC GCAGCACAAG
GTGGCACACA TTCATAAAAC GGATTCTGCA CCACAAAATG CAAATTCTGG ATCAAACAAA
GGCTTTTTGT GGATGGCCTT GATTTTATTG GTCTTAGCCG TAGCTTTATG GCTTTATAAC
AGTGGCACAT TGGCCTAA
 
Protein sequence
MSNYNNTNQT QWQLTALTEA LGNLELNVDH KLTVGRGQDN DVVLGSKQVS RQHAELTVVD 
DELLVQDLGS SNGTLVNDVR LEPHQPKSLV VDDVVTFAAF SFQVKQTQPL DSAAVSSLEP
EVETIEPEVE TIEPEVETIE PEVETIEPEV ETIEPEIETV EPEAIEPEVE TVEPEVIEPQ
TVEPIETAEI VEAPATHPVE PLAEPITPTA QPEKTDSEFD KFEAAERAEH QAEENAEAIE
KSGIKNMTEA ELEQKLEEEL EQPTGVYNSE QNHLHKDDAE HFAELAREAD PEVHKSKQAA
AAQMSATTNL HDTVEPDTKK PVKELTGDAE NEINTQTQAP VSEKNPANSF NTVNEQPQHK
VAHIHKTDSA PQNANSGSNK GFLWMALILL VLAVALWLYN SGTLA