Gene PsycPRwf_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2043 
Symbol 
ID5205301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2546482 
End bp2547672 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content47% 
IMG OID640600279 
Productelongation factor Tu 
Protein accessionYP_001280933 
Protein GI148653840 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000675899 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG CCAAGTTCGA ACGTAACAAG CCGCACGTAA ACGTCGGTAC CATCGGTCAC 
GTTGACCACG GTAAAACCAC TCTAACAGCT GCTATCGCAA CTGTAGCTGC AAAAACTTTT
GGTGGCGAAG CCAAAGACTA CGCTGCAATT GACTCAGCAC CAGAAGAAAA AGCCCGTGGT
ATTACAATCA ACACCTCACA CATTGAGTAT GACACTGCTG ACCGTCACTA CGCACACGTA
GACTGCCCAG GTCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCCGC TCAGATGGAC
GGTGCTATTC TAGTCGTATC AGCTACTGAC GGCCCAATGC CACAAACTCG TGAGCACATC
TTGTTATCAC GTCAGGTTGG CGTACCATAC ATCATGGTAT TCATGAACAA ATGTGACATG
GTTGACGACG AAGAATTACT AGAGCTAGTA GAAATGGAAG TACGTGAATT ACTTTCAGAC
TACGACTTCC CAGGTGATGA CACACCAATC ATCAAAGGTT CAGCCTTAGA AGCCCTAAAC
GGTAAAGATG GCAAATATGG TGAGCCAGCA GTTATCGAAC TACTAAACAC CCTAGACACC
TATATCCCTG AACCTGAGCG TGACATCGAT AAGCCATTCT TGATGCCTAT CGAAGACGTA
TTCTCAATCT CAGGTCGTGG TACTGTTGTA ACTGGCCGTG TTGAGTCTGG TATCGTTAAA
GTTGGTGACG AGATTGAAAT CGTTGGTATC CGTGACACTC AAAAAACCAC CTGTACAGGT
GTTGAGATGT TCCGTAAGCT ACTAGACGAA GGTCGTGCTG GTGAGAACTG TGGTGTACTA
CTACGTGGTA CTAAGCGTGA AGACGTACAA CGTGGCCAAG TACTAGCTAA GCCAGGTTCA
ATCACTCCGC ACACTAAGTT TGACGCTGAA GTATACGTAT TATCAAAAGA AGAGGGTGGT
CGTCACACAC CATTCCTAAA CGGCTATCGT CCACAGTTCT ACTTCCGTAC AACTGACGTA
ACTGGTGCTA TTTCTCTACA AGAAGGTACT GAAATGGTAA TGCCAGGCGA TAACGTTGAG
ATGAGCGTAG AGCTTATCCA CCCAATCGCT ATGGACAAAG GTCTACGTTT CGCAATCCGC
GAAGGTGGCC GTACTGTAGG TGCTGGTGTT GTTGCTAACG TTAAAGACTA A
 
Protein sequence
MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AIATVAAKTF GGEAKDYAAI DSAPEEKARG 
ITINTSHIEY DTADRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSATD GPMPQTREHI
LLSRQVGVPY IMVFMNKCDM VDDEELLELV EMEVRELLSD YDFPGDDTPI IKGSALEALN
GKDGKYGEPA VIELLNTLDT YIPEPERDID KPFLMPIEDV FSISGRGTVV TGRVESGIVK
VGDEIEIVGI RDTQKTTCTG VEMFRKLLDE GRAGENCGVL LRGTKREDVQ RGQVLAKPGS
ITPHTKFDAE VYVLSKEEGG RHTPFLNGYR PQFYFRTTDV TGAISLQEGT EMVMPGDNVE
MSVELIHPIA MDKGLRFAIR EGGRTVGAGV VANVKD