Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2043 |
Symbol | |
ID | 5205301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2546482 |
End bp | 2547672 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600279 |
Product | elongation factor Tu |
Protein accession | YP_001280933 |
Protein GI | 148653840 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000675899 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG CCAAGTTCGA ACGTAACAAG CCGCACGTAA ACGTCGGTAC CATCGGTCAC GTTGACCACG GTAAAACCAC TCTAACAGCT GCTATCGCAA CTGTAGCTGC AAAAACTTTT GGTGGCGAAG CCAAAGACTA CGCTGCAATT GACTCAGCAC CAGAAGAAAA AGCCCGTGGT ATTACAATCA ACACCTCACA CATTGAGTAT GACACTGCTG ACCGTCACTA CGCACACGTA GACTGCCCAG GTCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCCGC TCAGATGGAC GGTGCTATTC TAGTCGTATC AGCTACTGAC GGCCCAATGC CACAAACTCG TGAGCACATC TTGTTATCAC GTCAGGTTGG CGTACCATAC ATCATGGTAT TCATGAACAA ATGTGACATG GTTGACGACG AAGAATTACT AGAGCTAGTA GAAATGGAAG TACGTGAATT ACTTTCAGAC TACGACTTCC CAGGTGATGA CACACCAATC ATCAAAGGTT CAGCCTTAGA AGCCCTAAAC GGTAAAGATG GCAAATATGG TGAGCCAGCA GTTATCGAAC TACTAAACAC CCTAGACACC TATATCCCTG AACCTGAGCG TGACATCGAT AAGCCATTCT TGATGCCTAT CGAAGACGTA TTCTCAATCT CAGGTCGTGG TACTGTTGTA ACTGGCCGTG TTGAGTCTGG TATCGTTAAA GTTGGTGACG AGATTGAAAT CGTTGGTATC CGTGACACTC AAAAAACCAC CTGTACAGGT GTTGAGATGT TCCGTAAGCT ACTAGACGAA GGTCGTGCTG GTGAGAACTG TGGTGTACTA CTACGTGGTA CTAAGCGTGA AGACGTACAA CGTGGCCAAG TACTAGCTAA GCCAGGTTCA ATCACTCCGC ACACTAAGTT TGACGCTGAA GTATACGTAT TATCAAAAGA AGAGGGTGGT CGTCACACAC CATTCCTAAA CGGCTATCGT CCACAGTTCT ACTTCCGTAC AACTGACGTA ACTGGTGCTA TTTCTCTACA AGAAGGTACT GAAATGGTAA TGCCAGGCGA TAACGTTGAG ATGAGCGTAG AGCTTATCCA CCCAATCGCT ATGGACAAAG GTCTACGTTT CGCAATCCGC GAAGGTGGCC GTACTGTAGG TGCTGGTGTT GTTGCTAACG TTAAAGACTA A
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Protein sequence | MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AIATVAAKTF GGEAKDYAAI DSAPEEKARG ITINTSHIEY DTADRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSATD GPMPQTREHI LLSRQVGVPY IMVFMNKCDM VDDEELLELV EMEVRELLSD YDFPGDDTPI IKGSALEALN GKDGKYGEPA VIELLNTLDT YIPEPERDID KPFLMPIEDV FSISGRGTVV TGRVESGIVK VGDEIEIVGI RDTQKTTCTG VEMFRKLLDE GRAGENCGVL LRGTKREDVQ RGQVLAKPGS ITPHTKFDAE VYVLSKEEGG RHTPFLNGYR PQFYFRTTDV TGAISLQEGT EMVMPGDNVE MSVELIHPIA MDKGLRFAIR EGGRTVGAGV VANVKD
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