| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2039 |
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| Symbol | rplA |
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| ID | 5206112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2543565 |
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| End bp | 2544266 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600274 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001280929 |
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| Protein GI | 148653836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00170019 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC TTACTAAACG TCAAAAAATG ATCGCTGAGC GTGTAGAAAG CCAAAAGCTT
TACACGCTTG AAGAAGCGGT AAGCATTTTA AACGACCTAC CACCTCTTAA ATTCAAAGAG
TCAGTTGATA TCGCTATCAA CCTAGGCGTA GACCCACGTA AATCAGACCA AGTGGTTCGT
GGTGCAACTA ACCTACCTGC AGGTACTGGT AAAACTAAGC GTGTTGCTGT ATTCGCCCAA
GGCGCTGCTG CTGATGCTGC TAAAGAAGCC GGTGCTGACG TAGTGGGTAT GGATGATCTA
GCGGAACAAG TTAAAGCGGG CAACCTAGAC TTTGACGTTG TTATCGCAGC ACCAGACGCA
ATGCGTGTTG TTGGTCAGTT AGGTACTATC CTAGGTCCAC GTGGCCTAAT GCCTAACCCT
AAAGTAGGTA CAGTTACTCC TAACGTTGCT GAAGCAGTTG CAAACGCTAA AGCAGGTCAG
GCGACTTACC GTGTAGATAA AGCAGGTATC ATCCACACCA CTATCGGTCA GGTTGGTTTC
ACTGTTGAAC AAATCCAGCA GAACGTACAG GCTTTATTAG CAGACATCCG TCGTGCTAAG
CCAGCTACTT CTAAAGGTAT CTACATCAAA AAAATTACTT TATCTAGCAC CATGGGTCCT
GGTATCGCAT TAGATCCACT ACCATACCGC GTAGCTAAGT AA
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| Protein sequence | MSKLTKRQKM IAERVESQKL YTLEEAVSIL NDLPPLKFKE SVDIAINLGV DPRKSDQVVR
GATNLPAGTG KTKRVAVFAQ GAAADAAKEA GADVVGMDDL AEQVKAGNLD FDVVIAAPDA
MRVVGQLGTI LGPRGLMPNP KVGTVTPNVA EAVANAKAGQ ATYRVDKAGI IHTTIGQVGF
TVEQIQQNVQ ALLADIRRAK PATSKGIYIK KITLSSTMGP GIALDPLPYR VAK
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