| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2035 |
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| Symbol | |
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| ID | 5206440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2532975 |
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| End bp | 2537195 |
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| Gene Length | 4221 bp |
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| Protein Length | 1406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600270 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001280925 |
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| Protein GI | 148653832 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGATT TACTCGATAT TATGAAAAGC CCTGCCGACA ACGGCAAACG TGAATTTGAT
AGCATTCAGA TTACATTGGC AGCTCCCGAG ACTATTAAAT CATGGTCACA TGGTGAAGTA
AAAAAACCAG AAACCATTAA CTACCGTACC TTTAAGCCTG AGCGTGACGG TCTATTCTGT
GCCAAAATCT TTGGTCCAGT AAAAGACTTT GAATGTTTAT GTGGTAAGTA CAAGCGCCGC
AAATTCCAAG GCGTAATCTG TGAAAAATGT GGCGTAGAAG TGACCACTGC CAAAGTTCGT
CGTGACCGCA TGGGCCACAT CGATCTTGCC AGCCCTGTTG CGCACATTTG GTTCTTAAAG
TCATTACCAA GCCGCATCGG TTTATTACTT GATATGACAC TACGTGATAT CGAGCGCGTA
TTGTATTTTG AAAGCTATGT GGTAACCGAT CCTGGCATGA CGTCTTTAGA GAAGTATCAG
CTTCTTGATG ATGAAGACTA CTACAAAGCA TTAGAAGAAT TTGGTGATGA GTTCATCGCT
AAAATGGGTG CTGAAGCGGT TCAAGACCTG TTAAAAGATA TCGATATCGA TTTAGAAATT
GATGATCTAC GTGAAGCGAT TCCAAATACT GGTTCTGAAA CCAAGCTTAA AAAGATGTCT
AAGCGTCTAA AATTATTAGA AGCTTTCCGT GACTCTAATA ACAAGCCTGA GTGGATGGTT
ATGAGCATTT TGCCCGTACT ACCACCAGAT TTACGTCCTC TAGTACCGCT AGAAGGCGGC
CGTTTTGCGA CCTCAGATCT AAACGACTTA TATCGCCGTG TGATTAACCG TAACAACCGT
TTAAAGCGTC TATTAGAGCT TAACGCCCCT GACATTATCG TACGTAACGA AAAACGTATG
CTACAAGAGT CAGTGGATGC GCTACTTGAT AACGGTCGTC GTGGCCGTGC CATCACGGGC
AGCAACAAGC GTCCATTAAA ATCGCTTGCT GACATGATTA AAGGTAAGCA AGGTCGTTTC
CGTCAAAACT TACTAGGTAA GCGTGTTGAC TACTCTGGCC GTTCGGTGAT TGTTGTTGGT
CCAACACTGC GTCTACATCA GTGTGGTCTG CCTAAGAAAA TGGCACTTGA GCTATTCAAG
CCATTTACTT ACTCAAAACT ATTGTCACAC GGTATGGCAA CAACCATCAA ACAAGCGAAG
AAGATGGTAG AGCGTGAAGA GCCACAAGTT TGGGATATGC TGGCCATGGT TATCCGTGAG
CATCCAGTAT TACTAAACCG TGCGCCAACG CTACACAGAT TGGGTCTTCA AGCATTTGAG
CCTGTACTAA TTGAAGGTAA AGCCATTCAG CTGCATCCGC TGGTATGTAC CGCGTTTAAC
GCTGACTTCG ACGGTGACCA AATGGCAGTA CACGTGCCAT TGACTCTAGA AGCACAGCTA
GAAGCCCGTA CGTTGATGAT GTCAACCAAC AACATCCTAT CACCTGCTAA CGGTGATCCG
ATTATTGTGC CATCACAAGA CGTTGTACTG GGTCTGTACT ACATCAGCCG TTCAGCAGTT
AACGCTAAAG GCGAAGGCAT GATCTTTGCG ACCGTTAACG AAGCATTGCG CGCTATTGGT
TCAAACGACT TACATGTAAA CGCCAAAATT AAAGTACGTG TGACTGAGAC CATCTTTGAT
GAAGAGGGTA ACTCGACCAA ACAAACCACG CTGCAAGAAA CTGTGGCCGG TCGTCTACTT
ATCTGGAATG TCATGCCAAA AGGTATGCGT TTTGCTGAGT GTAACGTTGA GATGACTAAG
AAAAACATCT CAAAACTAAT GAACTCTTGC TACCGTACGC GCGGCGTGAA AGAAAGTGTT
ATCTTCGCTG ACCAATTAAT GTACCTAGGT TTTGCTCAAG CAACCCTATC AGGTGTGTCT
ATTGGTATCG AGGATATGGT TATCCCGCCA ATGAAAAAAG AGCTTATCGA AGCGGCTGAT
GCTGAAGTTC GTGAAATCGA ACAACAGTTT GAGCAAGGTT TCGTAACCGC TGGTGAGCGC
TACAACAAAG TTGTCGATAT CTGGTCACGT ACCAACGACA AAGTGGCTAA AGCGATGATG
GATAACTTGG CGACTGATAT CGTTATCAAC GCACAAGGTG AAGAAGAAGA GCAAAAATCA
TTCAACTCTA TCTTCATCAT GTCAGACTCG GGTGCTCGTG GTAGTGCAGC GCAGATTCGT
CAGTTAGCCG GTATGCGTGG TCTAATGGCT AAGCCAGATG GCTCTATTAT TGAAACCCCG
ATTAAGGCCA ACTTCCGTGA AGGTCTATCG GTTCTTCAGT ACTTCATCTC GACCCACGGT
GCGCGTAAAG GTCTTGCCGA TACGGCACTT AAGACTGCCA ACTCGGGTTA CTTGACTCGT
CGTCTGGTTG ACGTGGCGCA AGATTTGGTA ATCACTGAGA ACGATTGTGG TACCGAAAAA
GGCGTTCGCA TGACACCACA CATTCAAGGC GGTGAAATCA TTGAGAAACT AGGTGACCGT
GTTCTAGGTC GTGTGGTTGC TCGTGATGTG ATGAGCCGTG AAGATGAGGT GTTATTAGCC
GCAGGTACGT TGATTGATGA GCATGGCGTA ACGGTTATTG ATGACAATGG TATCGATGAA
GTATGGGTAC GCTCAGTCAT TACTTGTGAT GTACCACACG GTGTTTGTGC TCAGTGTTAT
GGCCGTGACT TGGCACGTGG TCACAAAGTG AATATTGGTG AGTCTGTGGG TGTTATGGCC
GCTCAGTCAA TCGGTGAGCC AGGTACTCAG TTAACCATGC GTACGTTCCA CGTGGGTGGT
GCCGCAAGTT CTACTTCAGT AGACAATAGC ATCTCTGCCC GCAACACAGG TTTCATCCGC
TTCCATAACA TGAAGACGGT GGACCACGTG GATGGTCACT TAGTTATCGT ATCGCGTTCA
GCTGAAATCG GTATTGCTGA TGATGTTGGC CGTGAGCGTG AGCGCTATAA AGTTCCTTAT
GGTTCAAGCG TACTGGTGAA AGACGGTGAT GAAGTTGAAA GCGGACAAGC GATTGCTAAA
TGGGATCCGC ACACGCACCC AATTATCACA GAATTCGCGG GTAAGGCACG TTTCAGCGAC
ATTATCGATG GCTCAACTGC CACCGTTAAG ATTGATGAAG CAACCGGTAT GAGCTCGTTT
GAAATCTTGG GTTCAAAAGA CCGTCCAAGT AACTCAAAAG ACTTACGTCC AGCGATTATT
CTAGATACTA CGGGCGGTAA AGAAGTGGTT TACTTCTTAC CTGCTGAGAC CATTATCCGT
GTTTCTGATG GCGAAGAAGT GACAGCAGGT TCGGTATTAG GCCGTGTACC ACAAGCCACG
TCAGGTACCA AAGATATTAC CGGTGGTCTA CCACGTGTTG CTGACTTGTT CGAAGCACGT
CGTCCGAAAG ATCATGCCAT CATGGCAGAG ATGTCAGGTG TGGTAAGCTT CGGCTCATCA
ACTAAAGGTA AGAACCGCTT CATCATCACT AATGAAGATG GCGAAGTACA TGAAGAGCTG
ATTCCAAAAT GGCGCCAAAT CAACGTGTTC GAGAACGAAA CCGTTGCCCG TGGTGAAGTT
ATTGCAGATG GCCCATTAAA TCCGCATGAC ATCTTGCGTC TACAAGGCGA AACTGCGCTG
GCTAACTACA TTGTGGATGA AGTACAGGAT GTATACCGCT TGCAGGGCGT TAAGATCAAC
GATAAGCACA TTGAAGTGAT TATCCGTCAG ATGTTGCGTA AAGTAGAAAT TACTGATGCC
GGTGATTCAA ACTACTTCAA GGGCGATCAG GTGGAATACG CTGATGTGAA AGCCACTAAC
GAAAAACTGC TTGCTGAAGA TAAATTCCCA GTACAGTTTG AACGTCAGTT ATTGGGTATC
ACCAAAGCCA GCTTGGCAAC TGAAAGCTTC ATCTCAGCGG CTTCGTTCCA GGAAACCACA
CGCGTATTAA CTGCTGCTGC TGTTGAGGGT AAAGTTGATG AGCTACGTGG TCTAAAAGAA
AACGTGGTTG TGGGTCGTCT GATCCCAGCG GGTACAGGTC TTGCTTATCA TGCGGCGCGC
AAAAAAGCCA AAGAAGGCAA ACCTGCTTAT GATGTTGAAA GTGCTCTAGA TGCCGCTTTT
GATATCGAAG CCACGACCTC AGCTCAAGAC TTCAGAAGCT TCGATGAAGC GTTTGCTCAA
GAGTTGAGTC AAGACAAATA G
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| Protein sequence | MKDLLDIMKS PADNGKREFD SIQITLAAPE TIKSWSHGEV KKPETINYRT FKPERDGLFC
AKIFGPVKDF ECLCGKYKRR KFQGVICEKC GVEVTTAKVR RDRMGHIDLA SPVAHIWFLK
SLPSRIGLLL DMTLRDIERV LYFESYVVTD PGMTSLEKYQ LLDDEDYYKA LEEFGDEFIA
KMGAEAVQDL LKDIDIDLEI DDLREAIPNT GSETKLKKMS KRLKLLEAFR DSNNKPEWMV
MSILPVLPPD LRPLVPLEGG RFATSDLNDL YRRVINRNNR LKRLLELNAP DIIVRNEKRM
LQESVDALLD NGRRGRAITG SNKRPLKSLA DMIKGKQGRF RQNLLGKRVD YSGRSVIVVG
PTLRLHQCGL PKKMALELFK PFTYSKLLSH GMATTIKQAK KMVEREEPQV WDMLAMVIRE
HPVLLNRAPT LHRLGLQAFE PVLIEGKAIQ LHPLVCTAFN ADFDGDQMAV HVPLTLEAQL
EARTLMMSTN NILSPANGDP IIVPSQDVVL GLYYISRSAV NAKGEGMIFA TVNEALRAIG
SNDLHVNAKI KVRVTETIFD EEGNSTKQTT LQETVAGRLL IWNVMPKGMR FAECNVEMTK
KNISKLMNSC YRTRGVKESV IFADQLMYLG FAQATLSGVS IGIEDMVIPP MKKELIEAAD
AEVREIEQQF EQGFVTAGER YNKVVDIWSR TNDKVAKAMM DNLATDIVIN AQGEEEEQKS
FNSIFIMSDS GARGSAAQIR QLAGMRGLMA KPDGSIIETP IKANFREGLS VLQYFISTHG
ARKGLADTAL KTANSGYLTR RLVDVAQDLV ITENDCGTEK GVRMTPHIQG GEIIEKLGDR
VLGRVVARDV MSREDEVLLA AGTLIDEHGV TVIDDNGIDE VWVRSVITCD VPHGVCAQCY
GRDLARGHKV NIGESVGVMA AQSIGEPGTQ LTMRTFHVGG AASSTSVDNS ISARNTGFIR
FHNMKTVDHV DGHLVIVSRS AEIGIADDVG RERERYKVPY GSSVLVKDGD EVESGQAIAK
WDPHTHPIIT EFAGKARFSD IIDGSTATVK IDEATGMSSF EILGSKDRPS NSKDLRPAII
LDTTGGKEVV YFLPAETIIR VSDGEEVTAG SVLGRVPQAT SGTKDITGGL PRVADLFEAR
RPKDHAIMAE MSGVVSFGSS TKGKNRFIIT NEDGEVHEEL IPKWRQINVF ENETVARGEV
IADGPLNPHD ILRLQGETAL ANYIVDEVQD VYRLQGVKIN DKHIEVIIRQ MLRKVEITDA
GDSNYFKGDQ VEYADVKATN EKLLAEDKFP VQFERQLLGI TKASLATESF ISAASFQETT
RVLTAAAVEG KVDELRGLKE NVVVGRLIPA GTGLAYHAAR KKAKEGKPAY DVESALDAAF
DIEATTSAQD FRSFDEAFAQ ELSQDK
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