Gene PsycPRwf_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2011 
Symbol 
ID5206682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2503482 
End bp2504663 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content50% 
IMG OID640600243 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001280901 
Protein GI148653808 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.271302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.806443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAG ATTCAATCGT TATTGTTAGT GGCGCCCGTA CCCCAATGGG TGGTTTCCAA 
GGCGACCTTA CTGGCGCAAC TTCTCCGCAG TTAGGTGCAG CTGCTATTAA AGCTGCTGTA
GAGCGCTCGG GTGTAAAGGC TGAAGAAATC GACGAAGTTA TCATGGGCTG TATCTTAACC
GCAGGCGTAG GCCAAGGCCC TGCTCGCCAA GCCATGCGTA ATGCAGGTAT CCCTGATAGC
ACTGGCGCTG TGACCATTAA CAAGCTATGC GGTTCAGGTC TAAAAGCAGT GATGCAGGCG
CATGATGCTA TTAAAGCAGG CAGTGCTGAG ATTATCGTGG CAGGCGGCAT GGAATCTATG
ACCAATGCGC CTTATATTCT GCCAGGTGCA CGTGACGGCT ACCGCATGGG TCACAAAGAA
GTCAAAGACC ATATGTTCTT AGATGGCCTA GAAGATGCCG ATACCGGTAA ATTGATGGGT
CAATTTGCTC AAGAGATGGC CGATGAAAAA GGCTATACTC GTGAGCAAAT GGATGACTTC
GCTATTGAGT CATTAAACCG TGCGCTGACA GCCATCAAAG AAGGTCACTT TAAAGATGAA
ATCACGCCTG TTACTGTAAA AACGCGTAAA GGCGAAGTGG TTATCGAGAC CGATGAGCAG
CCTGCTAAAG CCAATGCTGA GCGCATCCCT ACCCTACGTC CAGCCTTCGC AAAAGAGGGG
ACCATCACCG CCGCTAATGC CAGCTCAATC TCTGATGGTG CTGCTGCGGT TGTGGTGACC
TCTGAACAAG TAGCCCAGGA CAAAGGCTTA AATATTGAAG CGCGTATCAT CTCTACCGCT
ACCAACTCGC TGCACCCTAG CAAATTCACC ATTGCCCCTA TTGGTGCAAT CGAAAAAGTG
CTACAAAAAG CAGGTTGGTC AGTAGAAGAT GTGGATCTGT GGGAGATCAA TGAAGCCTTT
GCTATGGTGA CCATGGCGGC AATGGATGAG CTAAATATTC CTCATGCCAA AGTCAACGTT
GAAGGCGGTG CATGTGCCCT AGGTCATCCA GTGGGCTGTT CGGGTGCCCG TATCTTGGTT
ACTCTAATCA ACTCATTGAA GCGCACCGGC GGCAAAAAAG GCGTGGCCTC ATTATGTATC
GGTGGCGGTG AAGCCGTTGC TGTCGCCATT GAAATTGCTT AG
 
Protein sequence
MSSDSIVIVS GARTPMGGFQ GDLTGATSPQ LGAAAIKAAV ERSGVKAEEI DEVIMGCILT 
AGVGQGPARQ AMRNAGIPDS TGAVTINKLC GSGLKAVMQA HDAIKAGSAE IIVAGGMESM
TNAPYILPGA RDGYRMGHKE VKDHMFLDGL EDADTGKLMG QFAQEMADEK GYTREQMDDF
AIESLNRALT AIKEGHFKDE ITPVTVKTRK GEVVIETDEQ PAKANAERIP TLRPAFAKEG
TITAANASSI SDGAAAVVVT SEQVAQDKGL NIEARIISTA TNSLHPSKFT IAPIGAIEKV
LQKAGWSVED VDLWEINEAF AMVTMAAMDE LNIPHAKVNV EGGACALGHP VGCSGARILV
TLINSLKRTG GKKGVASLCI GGGEAVAVAI EIA