Gene PsycPRwf_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2002 
Symbol 
ID5204816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2493172 
End bp2493960 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content48% 
IMG OID640600234 
Producthypothetical protein 
Protein accessionYP_001280892 
Protein GI148653799 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0269225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTA TCACCTACGC CCAGCAACAG CTCATTACCC GCTTATGCGT GCGCTGTGGA 
TTACTGTTGA TGCAATACGG GGCAGAGTCA GCCGTGGTGG TTGACCTCTC CAAGCGCCTT
GGTCTAGCGC TTGGTATGGA CAGTGTTGAG TGTGCGTTAA GCTTTAATGC ACTGACCCTA
ACCACCATCT TTAATGAGCG CTGCATCACC ACCACCCGCG ATACGATTAA TCAAAGTATC
AACGTCAACT TATTGGTACA AATTCAGCAG ATTGTGAATA AGACTGAAGC CACTGAGTGC
AGCGGCGACT TGGTGATTAC CACCTCTCAA GCTTTTGATG AGCTTGATAG AACCGTGTAT
CCCAGCTGGC TGGTGGCTCT CTTCGTCGGC AGCTCTTGTG CTACCTTTGC CGCGTTGCAT
GGTGGCAGCA GCTCTATTGT TGCGGTCACT TTTATAGCCG GCATGGTGGC GATGCTCACC
CGTATTTTTT TATCCAAACA CCACTTTAAT CCTTTTATGA CCGTCATTAT TACCGCCTTT
ATTGCCTCAC TTATTGGCGC CACCACCTAT TATTTTGATA TCGGTAATAA TGCGGATATT
GCGGTGGCCT CCAGTGTGCT ACTGTTGGTA CCAAGCTTTC CTTTAATCAA CTCGTTATCA
GATATCTTAA AGGGCTATGT CAATATTGGT ATTGGCCGTG CTGTCTTCAC TTATATGCTT
AGCTTATCGG CCTGTGTGGG CATTGTGATT GCGCTGGTCT TACTGCAAAT TCGGCATTGG
GGGTTTTGA
 
Protein sequence
MTPITYAQQQ LITRLCVRCG LLLMQYGAES AVVVDLSKRL GLALGMDSVE CALSFNALTL 
TTIFNERCIT TTRDTINQSI NVNLLVQIQQ IVNKTEATEC SGDLVITTSQ AFDELDRTVY
PSWLVALFVG SSCATFAALH GGSSSIVAVT FIAGMVAMLT RIFLSKHHFN PFMTVIITAF
IASLIGATTY YFDIGNNADI AVASSVLLLV PSFPLINSLS DILKGYVNIG IGRAVFTYML
SLSACVGIVI ALVLLQIRHW GF