Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2000 |
Symbol | |
ID | 5204814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2491081 |
End bp | 2491713 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640600232 |
Product | nitroreductase |
Protein accession | YP_001280890 |
Protein GI | 148653797 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0131844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAC TAGACCATTT AAACTGGCGT CATGCGGTTA AAGCATTTGA CCCAACCCAA AAAGTTAGCC AAGAAAACAT CGATAAAATC ATTGAAGCGG CCAGATTGGC ACCGACGTCT TCAGGCCTAC AACCCTTTAG ACTGTTGGTT GTCGAAAGCC AAGAGATCAA AGACAAACTG GTTAAAGGTG CACTAAACCC TGAGTGTATG CAAGAGTGCT CACATGTGCT AATTTTCGCT GGCTGGAATG ATTACAGCGA TCAAAAGGTC GATGATGTTT ATGACATGAC CACCGAACAG CGCGGTTTAC CACAAGGTCG TTTTAGCAGT TATACCGATA AGCTAAAAGA GATTTTCAAC AACCAAAGCA CCCAAGAAAA CTTTGAGCAC ATCGCTCGCC AAGCTTACAT TGCGATGGGT TTTGCTTTGG CACAAGCGGC TGAGCTAAGA GTCGATACCT GCCCTGCTGA AGGCTTTAGC ACAGATTTAG TAGACGAAGT ACTTGAGCTC GATAAGCAAG GTCTCAAAAG TATTGTGCTG ATGTATGTCG GCGTGGCTGA CCCTGAGCGT GACTGGATGG CACCGATGGC CAAAGTCCGT AACGCTGCTG AAGAGTTTGT GATTAAATAC TAA
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Protein sequence | MSLLDHLNWR HAVKAFDPTQ KVSQENIDKI IEAARLAPTS SGLQPFRLLV VESQEIKDKL VKGALNPECM QECSHVLIFA GWNDYSDQKV DDVYDMTTEQ RGLPQGRFSS YTDKLKEIFN NQSTQENFEH IARQAYIAMG FALAQAAELR VDTCPAEGFS TDLVDEVLEL DKQGLKSIVL MYVGVADPER DWMAPMAKVR NAAEEFVIKY
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