Gene PsycPRwf_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2000 
Symbol 
ID5204814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2491081 
End bp2491713 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID640600232 
Productnitroreductase 
Protein accessionYP_001280890 
Protein GI148653797 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0131844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC TAGACCATTT AAACTGGCGT CATGCGGTTA AAGCATTTGA CCCAACCCAA 
AAAGTTAGCC AAGAAAACAT CGATAAAATC ATTGAAGCGG CCAGATTGGC ACCGACGTCT
TCAGGCCTAC AACCCTTTAG ACTGTTGGTT GTCGAAAGCC AAGAGATCAA AGACAAACTG
GTTAAAGGTG CACTAAACCC TGAGTGTATG CAAGAGTGCT CACATGTGCT AATTTTCGCT
GGCTGGAATG ATTACAGCGA TCAAAAGGTC GATGATGTTT ATGACATGAC CACCGAACAG
CGCGGTTTAC CACAAGGTCG TTTTAGCAGT TATACCGATA AGCTAAAAGA GATTTTCAAC
AACCAAAGCA CCCAAGAAAA CTTTGAGCAC ATCGCTCGCC AAGCTTACAT TGCGATGGGT
TTTGCTTTGG CACAAGCGGC TGAGCTAAGA GTCGATACCT GCCCTGCTGA AGGCTTTAGC
ACAGATTTAG TAGACGAAGT ACTTGAGCTC GATAAGCAAG GTCTCAAAAG TATTGTGCTG
ATGTATGTCG GCGTGGCTGA CCCTGAGCGT GACTGGATGG CACCGATGGC CAAAGTCCGT
AACGCTGCTG AAGAGTTTGT GATTAAATAC TAA
 
Protein sequence
MSLLDHLNWR HAVKAFDPTQ KVSQENIDKI IEAARLAPTS SGLQPFRLLV VESQEIKDKL 
VKGALNPECM QECSHVLIFA GWNDYSDQKV DDVYDMTTEQ RGLPQGRFSS YTDKLKEIFN
NQSTQENFEH IARQAYIAMG FALAQAAELR VDTCPAEGFS TDLVDEVLEL DKQGLKSIVL
MYVGVADPER DWMAPMAKVR NAAEEFVIKY