Gene PsycPRwf_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1999 
Symbol 
ID5204813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2489857 
End bp2490915 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID640600231 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001280889 
Protein GI148653796 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.027865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTA TTAATAAATC CAACCTCCAT CAGCTGAGTA CAAAAACCCG CAATGCCTTG 
ATGAAAAGCG TGGTGCGCTT GCCGACAGCA GCCAAACAAC AGATAGCAGG TGAGCCTATT
GTCATTGATG GGCAAACCTT TGATTTATCC CTACAAGTGA TGCTACAGCT GTTCGGTCCA
CCGCCCAATC ATCTGCCCAG TGTCACAGAA GCTCGAGCAA CCATTGAGGC GCAAAGCCCT
GTGCTCAGTC AGACACCTCT GGACGATATT ATCAAAGATG AGTTCCCACT AACGGTATCT
GATGGCGAGA CGATTCGCTT GCGCCGCTAT CGTCACCGCA ATGCGCCACG TGACAATCAG
CCAGCTTTGG TGTTTTACCA CGGTGGCGGT TATGTTGGTG GTTCGCTCAA CTCTCACGAC
TTGGTCTGTC AGCATCTGGC CAATGGCGGC GAGTGTACGG TCATTGCTGT CGATTACCGT
CTGGCGCCTG AATACCCCTA TCCTACGCCT GTTAACGATG GGTTAACTGC TTATCGCTAT
ATTGCCAGTC ATGCGGATAA ATTCGGGATT GATGCCAATC GTTTGGCAGT CGGTGGTGAC
AGTGCAGGCG GTAACTTGGC GGCAGTGGTG GCACAGCAAA CCAAAAATGA CACGCATCCG
CCCAAGCTGC AATTATTATG GGTGCCTTGG GTCGATATGA GCGGTGAGCA TGAGTCCTAT
GAGCTGTTTG CCACAGGCTT TTTGTTAGAG CAAGCTCAGA TGCGCTGGTA CACCCATCAC
TATTTGGGTG ATACAGATAA GATTGATACC ACAGACCCTA TGGTCTCCCC TATATATGGT
GACCTGCAAG GCGTGGCACC TGCGGTGGTC ATGGTGGCAG GCTTTGACCC ACTGCGTGAT
GAGGGTGTTG AGTATGCCAA TAAATTAACA GCAGCAGGTG TCGATACCAC GCTTAAAGTG
TATGACAGCA TGCCGCATCT GTTTATGCTT TATGCTGGTG AAATTGATGC CGCCAAAGTG
GCTTTTGAGG ATGCGGTACA AGCACTAAAG CGGTTATAA
 
Protein sequence
MTIINKSNLH QLSTKTRNAL MKSVVRLPTA AKQQIAGEPI VIDGQTFDLS LQVMLQLFGP 
PPNHLPSVTE ARATIEAQSP VLSQTPLDDI IKDEFPLTVS DGETIRLRRY RHRNAPRDNQ
PALVFYHGGG YVGGSLNSHD LVCQHLANGG ECTVIAVDYR LAPEYPYPTP VNDGLTAYRY
IASHADKFGI DANRLAVGGD SAGGNLAAVV AQQTKNDTHP PKLQLLWVPW VDMSGEHESY
ELFATGFLLE QAQMRWYTHH YLGDTDKIDT TDPMVSPIYG DLQGVAPAVV MVAGFDPLRD
EGVEYANKLT AAGVDTTLKV YDSMPHLFML YAGEIDAAKV AFEDAVQALK RL