| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1995 |
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| Symbol | |
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| ID | 5204809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2483273 |
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| End bp | 2486251 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600227 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001280885 |
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| Protein GI | 148653792 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000659002 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACACG AACACATTAA GATTCGCGGC GCACGCACCC ACAACCTAAA AAATATCGAC
ATTGACATTC CTCGTGATAA ATTTGTGGTG ATCACCGGTT TGTCAGGCTC GGGTAAATCG
TCCTTAGCAT TTGACACCTT GTATGCAGAA GGCCAGCGCC GTTATGTCGA AAGCTTGTCG
GCGTATGCGC GTCAGTTCTT ATCCCAAATG GACAAGCCTG AGGTCGATAG CATCGAAGGC
TTATCTCCTG CCATTGCCAT TGAACAAAAA TCAACCAACC ACAACCCCCG CTCGACAGTG
GGTACCATTA CCGAGATTTA CGACTACCTG CGCCTGCTTT ATGCCCGCGT CGGCACCCCA
TTTTGTCCGG TGCATAACCT ACCCATGGTG GCACAGACCA TTACTGAGAT GGTCGATGAT
ATTATGGCGC TGCCTGAAGA CACCAAGCTG ATGATTTTAG CGCCGGTGAT TCGTGACCGC
AAAGGCGAGC ATGTGGTGCT GCTTGAGCAA TTGGTCGGTC AAGGTTTTGT GCGCGTCCGT
GTCGACGGTC ATGTCTATGA TATGGATGAG CTGCCTGCGC TTGAGAAGAA CAAAAAGCAC
ACCATTGAGG TGGTGGTTGA CCGCTTCAAA GTGCGTGAAG ATTTAGGCAA CCGTGTTGCG
GAGAGCTTAG AGACAGCACT GCGCTTAGGC AGCGATTTGG CTATTTTGAA TTATATGGAT
GGCAACCCAA ATCCTGATGC GTCTAACCAA GACAGCGATG ACCAGATTTT ATCAGCCAAA
CACTCATGCC CCATCTGCGA CCGCGCGGTG TCAGAGCTTG AGCCACGTCT GTTTAGTTTT
AACAACCCGT ATGGCGCTTG CCCTGCGTGT GATGGTCTTG GCAAACGTCA ATACTTCTCA
GCTGAAAAAC TCATCACCAA CCCCGAGAAG TCACTGAACC AAGGGGCTGT TAATGGCTGG
GACAAACGCC ATGCCTATTA CTTTGGGCTA TTAAACACGG TCGCTAAGCA CTACAACATC
GACATGGATA TCCCATGGCA AGAGATTGAC AAAGAGCACC GTGACATTAT CTTAAATGGC
TCAGGCAAAG AGAAAATCGA ATTTAACTTT ACTGATGAGC GTGGCCGTAA AACCAAAAAA
ACCACCCCAT TTGAGGGTGT ACTGCCCTAT CTTGAGCGCC GTTATGCCAA GACGCAAAGT
AACTTTGTGC GTGACGAGCT TGCCAAATAC TTAGCCGATA CCACCTGTAA CGTCTGTGAT
GGCGCGCGCT TAAACGAGAT TGCGCGTAAC GTACGTGTTG ACGGTCAAGG TATCGCTGAT
ATCGTGCAGA TGTCGATTGG TGATGCGGCC GACTATTATA AAGACCTACA AATGAGCGGC
TCAAAGGGTG AGATTAGCGA AAAAATCTTT AAAGAGATTA ACGAGCGTTT AAACTTCTTG
GTCAGCGTCG GTCTAGATTA TCTGAACCTT GCCCGCTCTG CCGAGACCTT ATCAGGCGGT
GAGGCGCAGC GTATTCGACT GGCCAGCCAA ATTGGCGCTG GTCTCATGGG CGTGATGTAC
GTGCTTGATG AGCCGTCTAT CGGTCTACAC CAGCGTGACA ATGACCGCCT ACTTCAGACC
CTAACCCGCC TACGCGATTT GGGTAATACG GTGCTGGTGG TTGAGCATGA TGAAGATGCC
ATTCGCCAAG CTGACCACGT GATTGACATC GGTGTTGGTG CTGGTGTGCA TGGCGGTCAT
GTGATTGCCC AAGGTACGAT GCAAGAGATT ATGGATGTGG AAGAGTCGCT AACCGGTCAG
TATCTGTCTG GTAAAAAAGA GATTGCCATT CCCAAAGTGC GTCACAAAGC CAAAACCATT
GACTTAAATA ATCCGCCAGA AAAAGCGCGC ATTATGCCAA TGGGCAAAGC CAAGGCTGCC
GCTGCGGCAA AAGAAGCGAA GAACAAAAAG CCAAAAGCGA AAAACATTGT GCCGATGCAA
ATTGAGCTAA AAGGCGCCAA CGGCAACAAC TTACAAGATG TGGATTTGAC CATTCCAATC
GGTACCTTTA CCTGTGTCAC AGGGGTATCG GGCTCGGGCA AATCAACACT GATTAACCGC
ACCTTGATGC CGCTTGCTGC CACTCAATTA AATAACGCCT CGACCTTAAT TCCCGATAAA
TACGACAGCA TTACCGGTCT TGAGTATCTG GATAAGATGG TCGATATTGA CCAAAGCCCG
ATTGGGCGTA CGCCTCGCTC TAACCCAGCG ACCTATACTG GCGTATTCAC CCCAATTCGT
GACTTATTCT CACAGACCCA AGAGGCCAAA GCCCGTGGTT ATAAAGCCGG CCGCTTTAGC
TTTAACGTCA AAGGCGGACG CTGTGAGACC TGTCAGGGTG ATGGCCTGAT TAAAGTGGAA
ATGCACTTCT TACCCGATAT GTACGTGCCG TGTGACATCT GTCATGGCAA GCGCTACAAC
CGTGAGACGC TTGAGATTCA CTACAAAGGC AAGAGCATCG CTGAAGTGTT GGACATGACG
GTTGAAGATG CGACTGAGTT CTTCTCAGCC ATTCCGCCGA TTCATCGCCG CTTGCAAGCG
CTGATGGATG TGGGCTTAAG CTATATCCGT CTGGGTCAAT CTGCGCCGAC CTTATCGGGC
GGTGAAGCGC AGCGTGTGAA GCTGGCACGT GAGCTTGCCA AGCGTGATAC GGGTCAGACG
CTGTATATCT TGGATGAGCC GACAACTGGT CTGCATTTCC ATGATATCTA TAAGCTGCTT
AACATCCTGC ATACCTTACG TGATAAGGGT AACACCATTG TGGTGATTGA GCATAACTTG
GATGTGATTA AGACCGCGGA CTGGATTGTG GACTTGGGTC CTGAAGGTGG TAAAAACGGC
GGCATGATTA TCGCTGAAGG TACGCCTGAA GAGGTTGCGA ATACCAAAGA ATCGTTCACC
GGTCAGTTCT TAAAGCCGAT GCTTGATAAA GCGTCGTAA
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| Protein sequence | MAHEHIKIRG ARTHNLKNID IDIPRDKFVV ITGLSGSGKS SLAFDTLYAE GQRRYVESLS
AYARQFLSQM DKPEVDSIEG LSPAIAIEQK STNHNPRSTV GTITEIYDYL RLLYARVGTP
FCPVHNLPMV AQTITEMVDD IMALPEDTKL MILAPVIRDR KGEHVVLLEQ LVGQGFVRVR
VDGHVYDMDE LPALEKNKKH TIEVVVDRFK VREDLGNRVA ESLETALRLG SDLAILNYMD
GNPNPDASNQ DSDDQILSAK HSCPICDRAV SELEPRLFSF NNPYGACPAC DGLGKRQYFS
AEKLITNPEK SLNQGAVNGW DKRHAYYFGL LNTVAKHYNI DMDIPWQEID KEHRDIILNG
SGKEKIEFNF TDERGRKTKK TTPFEGVLPY LERRYAKTQS NFVRDELAKY LADTTCNVCD
GARLNEIARN VRVDGQGIAD IVQMSIGDAA DYYKDLQMSG SKGEISEKIF KEINERLNFL
VSVGLDYLNL ARSAETLSGG EAQRIRLASQ IGAGLMGVMY VLDEPSIGLH QRDNDRLLQT
LTRLRDLGNT VLVVEHDEDA IRQADHVIDI GVGAGVHGGH VIAQGTMQEI MDVEESLTGQ
YLSGKKEIAI PKVRHKAKTI DLNNPPEKAR IMPMGKAKAA AAAKEAKNKK PKAKNIVPMQ
IELKGANGNN LQDVDLTIPI GTFTCVTGVS GSGKSTLINR TLMPLAATQL NNASTLIPDK
YDSITGLEYL DKMVDIDQSP IGRTPRSNPA TYTGVFTPIR DLFSQTQEAK ARGYKAGRFS
FNVKGGRCET CQGDGLIKVE MHFLPDMYVP CDICHGKRYN RETLEIHYKG KSIAEVLDMT
VEDATEFFSA IPPIHRRLQA LMDVGLSYIR LGQSAPTLSG GEAQRVKLAR ELAKRDTGQT
LYILDEPTTG LHFHDIYKLL NILHTLRDKG NTIVVIEHNL DVIKTADWIV DLGPEGGKNG
GMIIAEGTPE EVANTKESFT GQFLKPMLDK AS
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