Gene PsycPRwf_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1982 
Symbol 
ID5206497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2470257 
End bp2471492 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content47% 
IMG OID640600214 
Producthypothetical protein 
Protein accessionYP_001280872 
Protein GI148653779 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00280445 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGATAA AAACCTTAGC TCAGATTTTG GCAGAAAACG AGACTGGTGA TAAGAAATCC 
ACTCAACGTC AGTCAAAATC GGGGCAAGCA AAGTCAAAAA ACAGCGCGCA CCACACAACA
TCACGGGCAC AGACCAGCTC TGCCGGTACT ACCAATGATT GTGCGGTAGA TACGCTGCAA
GATTCTAAGC CGCAGCGGCT TGACGCTAAG CGCTCTAAAC TCTCCAAACC CTCACAGCAT
TCTAAGGCGG CTAGACCCTC GTACCGCAAA CGCTCTTATG CCAAAAAACC AAGCTTAGGA
AATAAACCAG ACCATACCGA TGAGTTTCAT ACTGATGTTG GCGGTGATAA TCAAGTAGAT
GTATCACCAG ACACTGCACA CAAGCTATCG GCTCAGCCTA AACAGCGTAA AAACAAAACA
TTCCATCCAG CCGCCCCTTA TCAGCCAAAA ACCCAGCTGG CTGAGCCCAT CAAAGAAGTC
GACCCCAATA GTATTAAAAG CTTATTGGCA CAGGTGAAGG CCGAAGCCCA ACAGCAAACA
GACGCTCTGG TACCCTTGGC TGAGGCATCG GCATCCACAC CGCAGTCCTA CTCTGCTGAC
CCTTCTGCAG ATAATGCCCT CATAACCGAT GACTTAGGCA TAGACAATCT ACCTGCTGCG
CTAAAAGCTT ACCTAAGAAC ACCTGAGCAA CGTCAAGCAG AAAAAGAGGA GATAAAAGCG
GAAAGTCGGC TGCGCTGGTT GGCTTTTTAT TATCTGTCTA GACGCGAACA CTCTGCAGGA
GAGCTGCGCC AAAAATTGCT CGATAAAGAG CAAGACCCAA AAAAAATAGA AGCCCTTTTA
CAAGAGTTTA AAGATAAAGG CTATCAAAGC GACCACCGCA CAGCGCTCAT GCTGATCCGT
GAAGGCATTC GTAAGGGCCG CGGCCGTGTT CGGATCAAGA ATGACTTTTA TAAACGCAAA
GTTGAGGTGC CTGCGAACAT CGATGAACTG ATTGATATGG CAATGGCGGA TAACGAAGAG
TTTGTCGATG TGTTGTCAGA TAATACATTG GTAGAAGGCG TCGACTGGCT GCGTTTGGCC
GTTGAAGCCC GGGTCAAAAA ATATGGTGAT GAGATTCCCA CTGACCAAAA AATAAAAGCG
CGTCAGCTTC GATTCTTGCA ATACCGCGGC TTTAAGCCTG ATATTTGTTT TGAGGCGATT
AAATATAACC TGCAAACACT TGATGAGCGG TTTTAA
 
Protein sequence
MQIKTLAQIL AENETGDKKS TQRQSKSGQA KSKNSAHHTT SRAQTSSAGT TNDCAVDTLQ 
DSKPQRLDAK RSKLSKPSQH SKAARPSYRK RSYAKKPSLG NKPDHTDEFH TDVGGDNQVD
VSPDTAHKLS AQPKQRKNKT FHPAAPYQPK TQLAEPIKEV DPNSIKSLLA QVKAEAQQQT
DALVPLAEAS ASTPQSYSAD PSADNALITD DLGIDNLPAA LKAYLRTPEQ RQAEKEEIKA
ESRLRWLAFY YLSRREHSAG ELRQKLLDKE QDPKKIEALL QEFKDKGYQS DHRTALMLIR
EGIRKGRGRV RIKNDFYKRK VEVPANIDEL IDMAMADNEE FVDVLSDNTL VEGVDWLRLA
VEARVKKYGD EIPTDQKIKA RQLRFLQYRG FKPDICFEAI KYNLQTLDER F