Gene PsycPRwf_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1981 
SymbolrecA 
ID5206496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2469061 
End bp2470110 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content47% 
IMG OID640600213 
Productrecombinase A 
Protein accessionYP_001280871 
Protein GI148653778 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00686398 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGACA ATAAAGCCAA AGCGTTAAAA GCAGCCTTAG GCCAAATCGA AAAACAATTT 
GGTAAAAACA CCATTATGCA TTTGGGCGAT AACTCCGCCA CGCTGGATGT GGACGTGGTC
TCTACCGGCT CACTTGGCTT AGATATTGCT TTAGGTATTG GCGGTTTGCC AAAAGGTCGT
ATTATTGAGA TTTATGGCCC AGAAAGCTCA GGTAAAACCA CATTGACCTT GCAAGCCATT
GCTGAGTGTC AAAAACAAGG CGGTACTTGT GCCTTTATCG ATGCCGAACA CGCTTTAGAT
CCCATCTATG CCCGTAAACT TGGGGTAAAT ACTGATGACT TATTGGTGTC TCAGCCTGAT
AATGGTGAGC AAGCGCTTGA GATTACCGAC ATGCTGGTAC GTTCAGGCGC ATTAGACATG
ATTGTTATTG ACTCGGTCGC TGCCCTTACC CCGCGTGCGG AGATTGAAGG TGAGATGGGT
GACAGCCACA TGGGCTTGCA GGCGCGTCTA ATGAGTCAGG CGCTACGTAA AATCACCGGT
AACGCCAAAC GCTCAAACTG TATGGTTATC TTTATTAACC AAATTCGTAT GAAAATTGGG
GTTATGTTCG GTTCGCCTGA AACCACAACC GGTGGTAATG CCCTTAAGTT CTACGCCTCA
GTACGTCTAG ATATTCGCCG TATTGGCGCG GTGAAAAGCG GTGATGAAAT CATTGGTAAC
CAAACCCGTG TTAAAGTTAT TAAAAACAAA ATGGCGCCAC CATTCCGTCA AGCTGAGTTT
GAGATTACTT ATGGTGAAGG CACCAACCAC TTGGCTGAAG TGATCGACTT AGGGGTTGAG
ATTGGCGTGG TCGGTAAGGC CGGTGCATGG TACAGTTATG GCGATGAAAA AATTGGGCAA
GGTAAAGCCA ACTCAGTGTT GTTCTTAAAA GACAATCCCG CCATTGCCGA AGAGATTGAA
GCCAAAATCC GTGCCGAAAA GCTGGCGGTA GAGCCAGAAA AAGGGGCTGA AGCTGTAGAT
GAGGTTGAGC CTGAATCTGA AGTCGAATAG
 
Protein sequence
MDDNKAKALK AALGQIEKQF GKNTIMHLGD NSATLDVDVV STGSLGLDIA LGIGGLPKGR 
IIEIYGPESS GKTTLTLQAI AECQKQGGTC AFIDAEHALD PIYARKLGVN TDDLLVSQPD
NGEQALEITD MLVRSGALDM IVIDSVAALT PRAEIEGEMG DSHMGLQARL MSQALRKITG
NAKRSNCMVI FINQIRMKIG VMFGSPETTT GGNALKFYAS VRLDIRRIGA VKSGDEIIGN
QTRVKVIKNK MAPPFRQAEF EITYGEGTNH LAEVIDLGVE IGVVGKAGAW YSYGDEKIGQ
GKANSVLFLK DNPAIAEEIE AKIRAEKLAV EPEKGAEAVD EVEPESEVE