Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1980 |
Symbol | |
ID | 5206495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2468004 |
End bp | 2468555 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640600212 |
Product | superoxide dismutase, copper/zinc binding |
Protein accession | YP_001280870 |
Protein GI | 148653777 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0783595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCT TATTCACAGC CTCTACCCTT TTAGCCTCAG CTTTAGCATT AAGTGCGTGT CAGAGCACCC CTACTAAACA AAGCGTGCCT GATGAAGCCC AACCGGTTTT AAAATCACAA ATTATGACCA CAGATGGCAG CAATAAGCAC ATAGGTGATA TGTTCTTACG TCCTGTGGCC GGCGGCGTTC AAGTCTTTGG TAAGCTACAA GGCTTGACAC CAGGCGCCAC CGTTGCGATG CACATTCATG AGACGGGCAG CTGTGCCGAT ATGGGTAAAG CGGCCGGTGG TCATTTTAAT CCTTACCATA AGTTGCATGG CAACCCTATG GGTGCAGAGA ACCATGCAGG CGACCTACCC AACTTGACTG CTGATGCCAA TGGTGTGGCC TCCATGAATT TTGTCAAAAA AGACATCTCT GTAGCGATGC AAGGCGATAA CAGTGTCTAT CGTCGTGCCT TTATCGTTCA TGGCGGTGTA GATGATTATG TCAGCCAGCC TGCGGGTAAT GCCGGTGCTC GTATCGCTTG TGGCATTATT GAGAAGTACT AG
|
Protein sequence | MKTLFTASTL LASALALSAC QSTPTKQSVP DEAQPVLKSQ IMTTDGSNKH IGDMFLRPVA GGVQVFGKLQ GLTPGATVAM HIHETGSCAD MGKAAGGHFN PYHKLHGNPM GAENHAGDLP NLTADANGVA SMNFVKKDIS VAMQGDNSVY RRAFIVHGGV DDYVSQPAGN AGARIACGII EKY
|
| |