Gene PsycPRwf_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1980 
Symbol 
ID5206495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2468004 
End bp2468555 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content49% 
IMG OID640600212 
Productsuperoxide dismutase, copper/zinc binding 
Protein accessionYP_001280870 
Protein GI148653777 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0783595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TATTCACAGC CTCTACCCTT TTAGCCTCAG CTTTAGCATT AAGTGCGTGT 
CAGAGCACCC CTACTAAACA AAGCGTGCCT GATGAAGCCC AACCGGTTTT AAAATCACAA
ATTATGACCA CAGATGGCAG CAATAAGCAC ATAGGTGATA TGTTCTTACG TCCTGTGGCC
GGCGGCGTTC AAGTCTTTGG TAAGCTACAA GGCTTGACAC CAGGCGCCAC CGTTGCGATG
CACATTCATG AGACGGGCAG CTGTGCCGAT ATGGGTAAAG CGGCCGGTGG TCATTTTAAT
CCTTACCATA AGTTGCATGG CAACCCTATG GGTGCAGAGA ACCATGCAGG CGACCTACCC
AACTTGACTG CTGATGCCAA TGGTGTGGCC TCCATGAATT TTGTCAAAAA AGACATCTCT
GTAGCGATGC AAGGCGATAA CAGTGTCTAT CGTCGTGCCT TTATCGTTCA TGGCGGTGTA
GATGATTATG TCAGCCAGCC TGCGGGTAAT GCCGGTGCTC GTATCGCTTG TGGCATTATT
GAGAAGTACT AG
 
Protein sequence
MKTLFTASTL LASALALSAC QSTPTKQSVP DEAQPVLKSQ IMTTDGSNKH IGDMFLRPVA 
GGVQVFGKLQ GLTPGATVAM HIHETGSCAD MGKAAGGHFN PYHKLHGNPM GAENHAGDLP
NLTADANGVA SMNFVKKDIS VAMQGDNSVY RRAFIVHGGV DDYVSQPAGN AGARIACGII
EKY