Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1976 |
Symbol | |
ID | 5206491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2462215 |
End bp | 2462829 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640600208 |
Product | 5-formyltetrahydrofolate cyclo-ligase |
Protein accession | YP_001280866 |
Protein GI | 148653773 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.14668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.27126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATA TACCCTCTCG CCGTGAAATT AACCGTAAGC GCCGCGCCTT ATCTGAGCAG CAGCGCCGTA GTGCCGGTAC TCTTGCCAGC CATCATCTGT CGAAGCTGAC CCCTCGCCTG CCTAAAGGCG CTAAAGTCGG TATTTATATC GATGACTTTG GTGAGCTACC CACCCAGCCC TTGTTAACAT GGTGCCAGCG TATGGGCTAT CAGGCCTACC TGCCGGTGAT TAATACGCTA GGCCGCGGCA ACAGACAGAT CCGATTTGCA CCTATTTATC GAAGCAAATT GGCCAACCTT GCCACCGTCC GCCACAGCTT TGGTATGAAA GAATCCAAAA GTCGCCATTT GTTAACTGCC GACCAATTAG ATTTGATACT GTGTCCGCTG GTCGCCGCTG ATGAACAAGG CAATCGCATG GGTATGGGTG GCGGCTTTTA TGACACCACG CTTGCCACGT CATATCACTA CAGCAGCTCA AAAAACCATC GCCGTCATCC GCTGCGTGTC GGCTGGGCAT ATGAGTTTCA GGTGGTGGAT CAGCTTGATA GGCAGCCTTG GGATGTGCCC TTGAATGCGT TAATCACCCC TAAAAAATTA CGTTGGTTTT CATAA
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Protein sequence | MTNIPSRREI NRKRRALSEQ QRRSAGTLAS HHLSKLTPRL PKGAKVGIYI DDFGELPTQP LLTWCQRMGY QAYLPVINTL GRGNRQIRFA PIYRSKLANL ATVRHSFGMK ESKSRHLLTA DQLDLILCPL VAADEQGNRM GMGGGFYDTT LATSYHYSSS KNHRRHPLRV GWAYEFQVVD QLDRQPWDVP LNALITPKKL RWFS
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