Gene PsycPRwf_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1976 
Symbol 
ID5206491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2462215 
End bp2462829 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content51% 
IMG OID640600208 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_001280866 
Protein GI148653773 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.14668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.27126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA TACCCTCTCG CCGTGAAATT AACCGTAAGC GCCGCGCCTT ATCTGAGCAG 
CAGCGCCGTA GTGCCGGTAC TCTTGCCAGC CATCATCTGT CGAAGCTGAC CCCTCGCCTG
CCTAAAGGCG CTAAAGTCGG TATTTATATC GATGACTTTG GTGAGCTACC CACCCAGCCC
TTGTTAACAT GGTGCCAGCG TATGGGCTAT CAGGCCTACC TGCCGGTGAT TAATACGCTA
GGCCGCGGCA ACAGACAGAT CCGATTTGCA CCTATTTATC GAAGCAAATT GGCCAACCTT
GCCACCGTCC GCCACAGCTT TGGTATGAAA GAATCCAAAA GTCGCCATTT GTTAACTGCC
GACCAATTAG ATTTGATACT GTGTCCGCTG GTCGCCGCTG ATGAACAAGG CAATCGCATG
GGTATGGGTG GCGGCTTTTA TGACACCACG CTTGCCACGT CATATCACTA CAGCAGCTCA
AAAAACCATC GCCGTCATCC GCTGCGTGTC GGCTGGGCAT ATGAGTTTCA GGTGGTGGAT
CAGCTTGATA GGCAGCCTTG GGATGTGCCC TTGAATGCGT TAATCACCCC TAAAAAATTA
CGTTGGTTTT CATAA
 
Protein sequence
MTNIPSRREI NRKRRALSEQ QRRSAGTLAS HHLSKLTPRL PKGAKVGIYI DDFGELPTQP 
LLTWCQRMGY QAYLPVINTL GRGNRQIRFA PIYRSKLANL ATVRHSFGMK ESKSRHLLTA
DQLDLILCPL VAADEQGNRM GMGGGFYDTT LATSYHYSSS KNHRRHPLRV GWAYEFQVVD
QLDRQPWDVP LNALITPKKL RWFS