| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1972 |
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| Symbol | |
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| ID | 5205472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2456988 |
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| End bp | 2458448 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600204 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001280862 |
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| Protein GI | 148653769 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000382948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.768189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATCCA CTAAGTTATC TGCTGTGTTT CCTGTATTAT CCACACTAGG GCTTGCCAGC
CTAGTTTTTA TTGCACCTAC CAGTTATGCT GAGCAAAAGC CGTTACCCAC TCTGGATAAC
AACCAGTTTA ATGTGTGTTT AGATAATCTG AGCCAGTCCT CAGCTTTTGC CAGTGTTAAA
GACACTTTGG CTCAGTATCG CCCGGCACAA GGCGACCCTA GCGTGTTAGA GTCGCTCGAT
TATCAACCTG AATTTCAAAA AGAGCCTTGG GATTATCTGG CAAGCTTGGT AGACGAAGAG
CGGGTTATCG ATGGCATTGC GGCCAGTGAG CGTTATGCCG ATGTCTTAGC ACGTATTGAA
GCGCAATACG GTGTCAACCG TTACGATGTG CTTGGCGTGT GGGGCGTTGA ATCTGACTTT
GGAACTACCC TTGGCAAAAA AGAGGTGGTG CAGTCCTTGG CTACCTTATC TTGCTTTGGT
CGCCGCCAAA GCTATTTTCG CAGTGAATAT GTCAGCGCCC TAAAAATCTT AAAGCAAGGC
GACATTGCCC CCAATGACTT TAAAGGCTCT TGGGCGGGTG CATTTGGGCA GACCCAATTT
ATGCCCTCAA CCTTCTTGCA ACTGGCACAA GACTTCGATG GTGATGGCCG AAAAGACTTG
GTCAATAGCC AAGCCGATGC CCTAGCCTCC ACCGCCAACT TCTTAAAAAA CAGTGGCTAT
CAGTCTGGAC AACCTTGGGG CTATGAGGTG CGCTTACCGG CCAATATTAA TGCCAGCAAT
GATCGCAAAA ACAAACAGCC CATTTCGCAT TGGCGCAACT TAGGCATTAC CTTGGTCGAT
GGCAGTGAGC TGTCTGATTC ACTCAGCAAT GCAGGCTTGT TGTTACCCGC CGGCAAAAAT
GGCCCCGCTT TCTTAGTCGG TCGTAATTTC GATGCGTTTT ATGCCTACAA TGCTTCTGAG
AACTATGCAT TAGCCATTGC TCATTTGTCT GATCGTATTG AGCAGCAAAA CACCGATGTG
GACTTTGCTA CGCCTTGGCC AACTGATGAT CCAGGCTTAA GCCGTAAACA GTCTCGAGAG
CTGCAGCAGG CGCTTAATTT ATTGGGTTAT GATATTGGCG AAGTTGATGG CATCATCGGT
GATGGTACCC GCCGCGCCAT TCAGCAATAT CAGACCGATA ATGGCTTAAC CCCCGATGGC
AGAGCCGGTA AAAAAATCCA TCAGCATTTG ATGCACGTTA CCGCCAATAT GCCGCAGCAT
GAGAGTGAGC CCGCTGATGA GGCGCAGCAT ACAGCCGATG ATGATCAATT GGCTACCGGC
AATGCCCACA GTGCCAGCAA AAAAATCAGC GAAACCAAGT CGGGTCTGAG TAAGTTGCTG
CAAATTAAAA GCCTAACGGC CATCTTGATA GGCCTGTTTA TTGTGCTGGT CATTGCACTG
GTGAGTAGAC GCAAACGCTA A
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| Protein sequence | MSSTKLSAVF PVLSTLGLAS LVFIAPTSYA EQKPLPTLDN NQFNVCLDNL SQSSAFASVK
DTLAQYRPAQ GDPSVLESLD YQPEFQKEPW DYLASLVDEE RVIDGIAASE RYADVLARIE
AQYGVNRYDV LGVWGVESDF GTTLGKKEVV QSLATLSCFG RRQSYFRSEY VSALKILKQG
DIAPNDFKGS WAGAFGQTQF MPSTFLQLAQ DFDGDGRKDL VNSQADALAS TANFLKNSGY
QSGQPWGYEV RLPANINASN DRKNKQPISH WRNLGITLVD GSELSDSLSN AGLLLPAGKN
GPAFLVGRNF DAFYAYNASE NYALAIAHLS DRIEQQNTDV DFATPWPTDD PGLSRKQSRE
LQQALNLLGY DIGEVDGIIG DGTRRAIQQY QTDNGLTPDG RAGKKIHQHL MHVTANMPQH
ESEPADEAQH TADDDQLATG NAHSASKKIS ETKSGLSKLL QIKSLTAILI GLFIVLVIAL
VSRRKR
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