Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1967 |
Symbol | |
ID | 5205467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2451310 |
End bp | 2451951 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640600199 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001280857 |
Protein GI | 148653764 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT CATCATTAAT TTCAGTCGCT ATTTTAAATA TCAGTCTGTT AAGCCTGCTA GGCTGTCAGA CTGTGTTAAC GTCAACAGAC AGTCCAAAAC AGATAGTGAC GACTGCTATT GAGGCAAGTC AGTTAGACAG TGATGAAGAT GGCGTGCCTG ATATCAATGA TGAGTGTCCG AATACACCTC AGAATATGGT CGTTGATCCA AATGGTTGCC CAGCGTCTTT ATTGCCAAAA GAAGGCTCAG TCCGCGCAGA GTTTAGAGCT TTTTATGACA CTAACAGTAG TGAGATAAAA AGCAAGTATC GTGAAGAATT AGACCGATGG GCCAAGAAGA TGGATGAATA TCCTGACGCT TATATGTTAA TTGAAGCTCA TATCTCTGAG CCAGAAGCAA GGCTTGAAGA AAATGCATCG CATCAGACAC TGGCTTTATC TCGAGTAGAA GGTATTAAAA ACTATCTCAT TCAAAAGCAT AATATTGACC CCAATCGTAT TAGAACTTAT ACCTACAGTG CTGAAAGGCC TATTGCCCCA AATGATGATG CCGAAGGGAT TAAGCTGAAT CAACGTGTGT ATGCTGTGAT TGATAATGCT GATTACTTTA TAAATGATAT TTTGAAAATT GAAAATGATT AA
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Protein sequence | MKFSSLISVA ILNISLLSLL GCQTVLTSTD SPKQIVTTAI EASQLDSDED GVPDINDECP NTPQNMVVDP NGCPASLLPK EGSVRAEFRA FYDTNSSEIK SKYREELDRW AKKMDEYPDA YMLIEAHISE PEARLEENAS HQTLALSRVE GIKNYLIQKH NIDPNRIRTY TYSAERPIAP NDDAEGIKLN QRVYAVIDNA DYFINDILKI END
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