Gene PsycPRwf_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1967 
Symbol 
ID5205467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2451310 
End bp2451951 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content39% 
IMG OID640600199 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001280857 
Protein GI148653764 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT CATCATTAAT TTCAGTCGCT ATTTTAAATA TCAGTCTGTT AAGCCTGCTA 
GGCTGTCAGA CTGTGTTAAC GTCAACAGAC AGTCCAAAAC AGATAGTGAC GACTGCTATT
GAGGCAAGTC AGTTAGACAG TGATGAAGAT GGCGTGCCTG ATATCAATGA TGAGTGTCCG
AATACACCTC AGAATATGGT CGTTGATCCA AATGGTTGCC CAGCGTCTTT ATTGCCAAAA
GAAGGCTCAG TCCGCGCAGA GTTTAGAGCT TTTTATGACA CTAACAGTAG TGAGATAAAA
AGCAAGTATC GTGAAGAATT AGACCGATGG GCCAAGAAGA TGGATGAATA TCCTGACGCT
TATATGTTAA TTGAAGCTCA TATCTCTGAG CCAGAAGCAA GGCTTGAAGA AAATGCATCG
CATCAGACAC TGGCTTTATC TCGAGTAGAA GGTATTAAAA ACTATCTCAT TCAAAAGCAT
AATATTGACC CCAATCGTAT TAGAACTTAT ACCTACAGTG CTGAAAGGCC TATTGCCCCA
AATGATGATG CCGAAGGGAT TAAGCTGAAT CAACGTGTGT ATGCTGTGAT TGATAATGCT
GATTACTTTA TAAATGATAT TTTGAAAATT GAAAATGATT AA
 
Protein sequence
MKFSSLISVA ILNISLLSLL GCQTVLTSTD SPKQIVTTAI EASQLDSDED GVPDINDECP 
NTPQNMVVDP NGCPASLLPK EGSVRAEFRA FYDTNSSEIK SKYREELDRW AKKMDEYPDA
YMLIEAHISE PEARLEENAS HQTLALSRVE GIKNYLIQKH NIDPNRIRTY TYSAERPIAP
NDDAEGIKLN QRVYAVIDNA DYFINDILKI END