| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1957 |
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| Symbol | |
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| ID | 5204831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2440031 |
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| End bp | 2441068 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600189 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001280847 |
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| Protein GI | 148653754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCAGT CAAATCAAAA CCCCGAAACC CAAGCTCCCG ATACACTACA AAGCGATGTT
ACCATTGACC ACAATGGCGA TTATCAGTTC GCAGCGCCTA CCACTTCTGC CAGCACAGCC
GGCACCGAAA AGCTACAAAA AGCATTGGCT CGTATGGGCC TAGGCTCACG TCGCCAAATG
GAAGAGGTCA TTAAAGCAGG CCGTGTTTCT ATTAACCAAA AACCTGCCAG CATCGGTGAT
CGTGTCGAAC AAGGCGATGA AATTCGTGTT GATGGCCGCC TAATTAAATA CAAATCTGAG
CGTGAAAAAC GCCGCCGCGT TTTGGCCTAT TACAAGCCAG AAGGTGAGAT CTGTTCTGCC
AATGATCCAG AAGGTCGTAC CACGGTATTT GAGCGTCTGC CTAAGCTGAC TCATGATCGC
TGGATTATGG TGGGTCGTCT AGACATTAAC TCTACGGGCT TATTATTATT CACCAACGAT
GGCGAATTGG CGCACCGTTT AATGCACCCA TCAAACGAGA TTGTACGTGA ATATGCGGTA
CGTATCTTAG GCGAGCTGAC CCCTGAAATG ATGCGCAATT TAACCGATGG CGTTATGCTT
GAGGATGGCC TTGCTAAGTT TGAAGACATC AAACAAGGCG GCGGTGAAGG CGTAAACAAA
TGGTATCACG TGAAGCTAAA AGAGGGCCGT AACCGTGAAG TACGCCGTCT GATTGAATCA
CAAGGCCTAA AAGTAAGCCG TCTACTGCGT ACCAGCTATG GCTCAGTGGA TCTACCCAAG
GAGCTACGTA CCGGCCGCTT TATCGAGCTT GATAGAAAAG ACATTCACCG TCTGATTGAT
CTGGTCGGCA TACGTCCTCG TGAAGACATG GGTGTGCATG GTAAAGCCAA AGAGAAAAAA
GAGCGCTTCC AGAAAAAACC GATGAAAGCC CGCACCATTC GTACCAGCTC TCGCAGCGGT
CGTGCCAGCA CCTCAACTGG CAAAAATACC AGTGCCACTC GTGGTAGAGA TACTGGTAAT
AGAGGCTCTA AGCGTTAA
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| Protein sequence | MPQSNQNPET QAPDTLQSDV TIDHNGDYQF AAPTTSASTA GTEKLQKALA RMGLGSRRQM
EEVIKAGRVS INQKPASIGD RVEQGDEIRV DGRLIKYKSE REKRRRVLAY YKPEGEICSA
NDPEGRTTVF ERLPKLTHDR WIMVGRLDIN STGLLLFTND GELAHRLMHP SNEIVREYAV
RILGELTPEM MRNLTDGVML EDGLAKFEDI KQGGGEGVNK WYHVKLKEGR NREVRRLIES
QGLKVSRLLR TSYGSVDLPK ELRTGRFIEL DRKDIHRLID LVGIRPREDM GVHGKAKEKK
ERFQKKPMKA RTIRTSSRSG RASTSTGKNT SATRGRDTGN RGSKR
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