Gene PsycPRwf_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1956 
Symbol 
ID5204830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2438825 
End bp2439832 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID640600188 
Productalpha/beta hydrolase fold 
Protein accessionYP_001280846 
Protein GI148653753 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATC AAACGCTTAA TCTTGTGACC ACAGCAGACC ATCAGCAAAT TGCTGTTTGG 
AAAATTACAG ATAATGAGGC CATTAAAAAT CCCCTAAATC CGTCCATAGG CAATCATAAA
AGACAAAATC TATTGTTGCT TCATGGCGCT TTTTCGGACA AAGGGGTCTG CCTCGGTATT
GCCAGTTATT TTGCGTCTTT AGGTTATCCC TGTTTTATTA TGGAATGGCG TGGTCATGGC
AGTAGCAGCC AGCCCAAAAC GCCCTATCAT TTAGAAGATA TCGCTTTTTA TGATGTGAGG
GCCACTCTTG ATTACTTAGT TAACGAGCTA AACCTCGATA ATTTACACTG TATCACCCAC
AGTGGTGGTG GTATTTGCCT AACCATGCTT CTGACCCGCC ATACTGAGTA TGTCGATAAA
ATATCTAGTA TCACTTTATT TGCCTGCCAA GCTTTTGCTG CAGCGACCAC CCCAGTCAGC
TACGCCAAAT TACTGCTAAG TAAAGCTGCC ACCCGTCAAA TGGGGATTGT AAGAGGCAAA
CGCCTAAAGC TTGGCACCAT GAATGAAAGT TACTATCTAC TGTCACAGTG GATGGACTGG
AACTTAAACC AAAACTTTAG TAGCTACTCG CCTACCCCGA TAAGACATCA GTTAAAACAG
GCCTTTAATC AGCGAATGCA TCGACTGATT GATAAACGCT CAGGCCAGGG TTTTCAACGT
CGTCATACCG CTGTTATCCC GCAGCAACCC TTCGATTACC GTACTGTGAT GCCCTATATC
ACTACGCCCA CTTATGCTAT TTGTGCAGCA GGTGACTCTG TTGCACCACC ACAAGGGTGC
TTAAAGTTTT TACAAGCCTT TAACAATGCT AACAATCACT TTCGGGAGTT TGGTATTGCC
AGTGGCGATT TAGAGAATTA TAACCATACC CGTATATTTT TAAGCCGTAA TGCTGCCGCC
GAAGTTTGGC CCACTGTACT TAACTGGATT GAAAAGCACA GCCGCTAA
 
Protein sequence
MIHQTLNLVT TADHQQIAVW KITDNEAIKN PLNPSIGNHK RQNLLLLHGA FSDKGVCLGI 
ASYFASLGYP CFIMEWRGHG SSSQPKTPYH LEDIAFYDVR ATLDYLVNEL NLDNLHCITH
SGGGICLTML LTRHTEYVDK ISSITLFACQ AFAAATTPVS YAKLLLSKAA TRQMGIVRGK
RLKLGTMNES YYLLSQWMDW NLNQNFSSYS PTPIRHQLKQ AFNQRMHRLI DKRSGQGFQR
RHTAVIPQQP FDYRTVMPYI TTPTYAICAA GDSVAPPQGC LKFLQAFNNA NNHFREFGIA
SGDLENYNHT RIFLSRNAAA EVWPTVLNWI EKHSR