Gene PsycPRwf_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1953 
Symbol 
ID5204827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2435897 
End bp2436994 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content46% 
IMG OID640600185 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001280843 
Protein GI148653750 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAG AACAAAATAC TTCAGAGCAC GCTCAAAAAG CCGAAGACAC TCAGCCAAAA 
CGTATCTTAA CTGGTGTTAC CACAACCGGT ATCCCACACT TAGGTAACTA TGTGGGTGCT
ATTCGTCCTG CGATTCAATC TGCGCAAAAC AGCCTAAATG AAGAAGATCA GTCTTTTTTC
TTTTTGGCCG ACTACCATGG CATTATCAAA TGCTATGACC CAAAACAAAT TCACGAATCA
ACCAAAGCCA TTGCTGCCAC TTGGCTTGCG TGTGGTCTTG ACCCTGAAAA GGTAGTGTTT
TATCGTCAAT CTGATGTGCC TGAGATTCCA GAGCTTGCGT GGATTTTAAA CTGTTCATGT
CCCAAAGGAC TGATGAACCG AGCCCATGCT TATAAAGCGG CGGTCGACAT TAATAATGAA
AAAAGTGACG TGGATCCCGA CCAAGGTATC ACCATGGGTC TGTTTGGGTA TCCTGTATTA
ATGGCCGCTG ACATCTTAAT GTTTAATGCC ACCCATGTGC CTGTCGGCCG TGACCAAATC
CAGCACATTG AAATGGCGCG CGATATCGCC GGTACGTTCA ACCACAAATA CAAGTCATTA
TTTACCCTAC CCTCTGCGGT GGTAGATGAA AATGTGGCGC TACTCACCGG TCTTGATGGT
CGCAAGATGA GCAAAAGCTA CGGCAATACC ATTCCTTTAT TTGGTGAATA TAACCCACAA
GTAGACCCCG AAAAGCAGAT GCGTAAGGCC ATCATGCAAA TTGTGACCAA TTCACAGGCC
CCTGAAGAGC CAAAAAATCC TGATGACTCG GTAATCTTTG AGATCTATAA AGCCTTTGGT
AGCACAGAAG AGATTGCAGA TTTACGTGCT CAGTTTGAGG CGGGGATTGC TTGGGGCGAT
GCTAAGCAGA TTTTATTTGA AAAAATTAAT AGTGAAATCG CCCCTTTCCG CGAGCGTTAT
TTTGAGCTGA TGGCCAACCC TAAAGAGCTA GAGGAAATCT TGCTCATGGG GGCCGAAAAA
GCCCGCCGTC ACAGCCGCAA ACAGTTGGAT AAAACGCGCC GTGCTATCGG TATTAAGCCG
TTAGCTAAGC TTAAATAA
 
Protein sequence
MTVEQNTSEH AQKAEDTQPK RILTGVTTTG IPHLGNYVGA IRPAIQSAQN SLNEEDQSFF 
FLADYHGIIK CYDPKQIHES TKAIAATWLA CGLDPEKVVF YRQSDVPEIP ELAWILNCSC
PKGLMNRAHA YKAAVDINNE KSDVDPDQGI TMGLFGYPVL MAADILMFNA THVPVGRDQI
QHIEMARDIA GTFNHKYKSL FTLPSAVVDE NVALLTGLDG RKMSKSYGNT IPLFGEYNPQ
VDPEKQMRKA IMQIVTNSQA PEEPKNPDDS VIFEIYKAFG STEEIADLRA QFEAGIAWGD
AKQILFEKIN SEIAPFRERY FELMANPKEL EEILLMGAEK ARRHSRKQLD KTRRAIGIKP
LAKLK