| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1948 |
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| Symbol | |
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| ID | 5205907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2427880 |
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| End bp | 2429439 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640600180 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001280838 |
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| Protein GI | 148653745 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCAT CCTTTACTAT TAAACCCCTC GTTACTGCCA TAGCGGCTTT CTCAGTTGCA
AGCGTTGCTC AAGCAGCAGG CCTTGATCGT TCAGGTCAAG ATACCACTGC GTTTTTCCAA
GATGGCACCT ATGCAGAAGC TGTTTATACT TACATCGATG CCGATGTAAC CGGCCGTGAT
GCTGCAGGCA ATAAAGTAAA AGATATTGCT GAGGATTATG ACTTCTTCCG TTATGGTGTA
AAAACAGATA TAGATAATAA ATTCAGTATT GGTGTGTTAT ATGACGAGCC TTGGGGCGCA
GCTGCTGATT ACCATGGTAA TAATGACTTT GTGGGCTCAC CAAGTCGAGT AGCAGATAGC
CTTATCTCAT CACGTTTAGG TAATGGTGCA CCTGAAGCTG ATAATATAGG CGTTAACAAC
GTTGAGCAGT TCAAAGGCTT TATCAATCAA ACAGCAGATA AACTAGCAGA AGGTCGACAG
CAGCTAGCAA CTTTACAAGG TTTTGAGCAG CAACTTGACG CAGCCATTGC TAGTGGCGCG
CCAATGTCAG CGATTGATCA ACAAGTGGCA GAGACGGCTG CACAATTAGG CCGACCAGAG
ATAAATAGCT TTGCTGCTTT TCAGCAACTG GTTAATGGGA CTGAGCAATC GCTTGCAGAT
GGAGAAGCAA ACTATCAGCG CTTGAAAGGT TTAGAAGGGG TGTTAGATAA CGCTCTTACA
AATACAGAAG CCACAGAAGT AGAGGTGCGC TCTGAAAGTT TAACCGGTTT ATTAGGCATG
AAGTTCGGTC AAAATAACAA TTACCAGATC TATGGTGGTC CGGTTGCCCA GCGCTTAAAA
GCCAAAGTAA AATTACGTGG TAATGCTTAT GAAACCGCAA CGGGCTACGA TTTAAATGTT
AATCCAGATA TTGACTATGG TTGGATCGCA GGTCTGCAAT ATAGTAAGCC TGAGATTGCA
TTAAAAGCAT CTTTAACCTA TCGCTCAGAG ATTGATCATG AGGTGACAGC TAGTGAGTAT
TTACCTTTAG CGGCCTTGCG TGGCGTGCCA CCAAATCAGG CTAATAAAAT GGAAATCACC
ACTCCTGAGT CTGTGAACTT TGATTTCCAA ACCGGTATTA ACCCAACAAC ACTAGCAACA
GCCAAAGTGC GCTGGGTGCC TTGGGGTGAC TTCAAAATTA CACCTCCTTT GTATAACGCC
GCATCACAGT TTGATTATGG ACCTAAGGGT TTAAATCTAG TGGATTATGA TGATGACCAG
TGGGTTGTTG AATTAGGCTT AGCAAAACGT CTACAACCCA ATCTAGCCAT TTCAGGAACT
ATTGGATGGG ACAGCGGCTC TGGTGATCCT ACCACTTCTT TAGGTCCTAT TGAGGGCTAC
TATAGCGTAG GTGCTGGTGC TAAATATAAT CTTGATGAAA ACTGGGCCAT TTCAGCCGGT
GGTAAATACC TATGGTTTGG TGATGCCAAA GGTCAGATTC CAAATGGCAA TATCGTAAGT
GATTTTAAAG ACAATGATGG CTTTATCTTG GGTGTAAAAC TGTCTTATCA AGATAAATAA
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| Protein sequence | MRSSFTIKPL VTAIAAFSVA SVAQAAGLDR SGQDTTAFFQ DGTYAEAVYT YIDADVTGRD
AAGNKVKDIA EDYDFFRYGV KTDIDNKFSI GVLYDEPWGA AADYHGNNDF VGSPSRVADS
LISSRLGNGA PEADNIGVNN VEQFKGFINQ TADKLAEGRQ QLATLQGFEQ QLDAAIASGA
PMSAIDQQVA ETAAQLGRPE INSFAAFQQL VNGTEQSLAD GEANYQRLKG LEGVLDNALT
NTEATEVEVR SESLTGLLGM KFGQNNNYQI YGGPVAQRLK AKVKLRGNAY ETATGYDLNV
NPDIDYGWIA GLQYSKPEIA LKASLTYRSE IDHEVTASEY LPLAALRGVP PNQANKMEIT
TPESVNFDFQ TGINPTTLAT AKVRWVPWGD FKITPPLYNA ASQFDYGPKG LNLVDYDDDQ
WVVELGLAKR LQPNLAISGT IGWDSGSGDP TTSLGPIEGY YSVGAGAKYN LDENWAISAG
GKYLWFGDAK GQIPNGNIVS DFKDNDGFIL GVKLSYQDK
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