Gene PsycPRwf_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1941 
Symbol 
ID5204808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2409534 
End bp2412356 
Gene Length2823 bp 
Protein Length940 aa 
Translation table11 
GC content43% 
IMG OID640600173 
Producthypothetical protein 
Protein accessionYP_001280831 
Protein GI148653738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTC ACTGTCATTC AAATTTGGTT GTGTCTTCAG CTAAAAAACT GAATACCCCT 
TTAAAACCAA GCGTTGTCTT ATTAACCTCT TTTATTTTCG CTTCAGTATC AGCCTATGCA
GGCACAAGTA CTAAGCAAAA CACACCTACC AATCCTGATG TTGCTGCTCA ATCTAATTTA
ACAGGAGTCC AGAGCAACGC CATTGGCAAG TCTGGTCTAG GTACCAGTAT TCGCTACACT
GAAATTTTAG ATAATGAGTC TGATAGTTAC AATCAGCTAG CCGTTCGAGC TGATCAAGTT
GCTTCAAAAA TGGCCAAGCA GGGTCCTATT GATATTCAAC TAACGGATCT AAATGACAGT
GATTTGGAGA ATGGCTTTAA GCAGCATTCT GGATTTACTG AAGTCGTGGG ACAAGACTCG
GCAGGTATCG CTCCACGAAA ACGCCGTATG GATTACACCA CCACCTACAA GAACTTCGAT
GATCAAATGC AAATTGGTCA TGTTCATGGT GACCTAAAAG CTCCGCTAAT AAACGTCGAT
GAATATCGTT TATCGAATGT CTACGTACAA GGGAATGCCA CAGATGAGGC AGATATTGAG
TTCTTACAAG GCTGGGCGCA GCATCATCAA GACACCAATC TAAGTGAAGG AGTGGTTCAG
TACACAGGTG ATGCGACCTA TATGGAGAAT TTACATCTTA AGGATGGTCA GCAAAGTAGC
CCTGTTGTGA ATGGTACCTC TGAATTTAAC GTTGATTTTG TCAAAGCTTT GCTTGAAGGG
ACGCTTAGTT TCCAAGATGG TGACTACAAG TATATGCCTG AAGGCAATAA AATCGGTATT
AAAGCGGGTA TAACCGGCAA TACTTTTAAA GGCAATAATA ATGGTATTGA TACCGCAGGT
AGCTTCTATG GAGAAGATGG TCGTCTGTTG GGCGGTATTT ATCAGCAAGC GTTAACACCT
GGAGGAGAGG GTAGTGCACC AGGTGAGGGA ACCACGTTCC AAGGCACCTT TGGCGCAAGT
AAAACTACTA AGACGCTCGA CCCTGTAGCC AATCCTGATG TTGCAGTTGA TTCGAATGTT
ACGGGCTTTC ACAGCAGTGC ATTAAGTAAT GATAACTTAA TCGGCCCAAG CATACACTAC
GGTGCTATTC GTGATAATAA GACAGGCAGT TATGATCAGT TGTCTATTCG AGCTAATGAA
ACTGATTCAC GAGAATACTA TGCAGCAGTG GGTGTGAACT TAACGGGTAG TGAAGACGCC
AGCTATGGCA ACGGCTTTAA GCAGCATACA GATGAGACAT TGATTGAGCT CGGACCAATT
TTAAGAAGAG ATTTTGAATA TCAGTCTATC TATAAAGATT TCGATGGCGA AATGCAAATT
GGTCATGTCT TAGGGGATCC TAAAGTTCGC TGGACAATCA TCACTCCAGG TCGCTTGTCT
AACGTCCATG TTCAAGGTAA TGCTACCAAC CTTACGGACA TGCAGTACAT GAAAGATTTG
GCTCAATATA AGGTAGACAG TGAGCTTAAT GACGGTAAGG TTGAGTATAA GGGTGTTGCC
ACTTATATGG AGAACCTGCA CTTAAAAGAT GGGAAGCGTG CTGGACCTGT AGTTGATGGT
ACCTCTACAT TTGATGTTGA TTTTATCAAT GCCAATCTTG AAGGGGAGCT AGCGTTTAAT
GCTGGTGACT ATAAGTATAT GCCAGAAGGC AATAAGATCA AGATTAAAGC GGATATTACT
GGTAATACCT TTGCTGGTAA TCTAAATAAT ATTGATACTG CAGGCGGTTT TTATGGTGAG
GATGCTAAGC TTTTGGGCGG AGTTTATCAA CAAGCTCTAA CCACAGGTGG AGTCGCTAAG
AAAAAGGGTG AGGGGACGAC ATTCCAAGGG ACGTTTGGCG CCAGTAAAGT AGAGACTAGG
GGCTCGAACG CACCAAGTGA GCCAGAGCTG CCTACGGTTG AGTCGGATAT GACGGGCTTC
CAGTCTACGA CGCTAAGTAG CAAGGAAAAA ACACTACCGT TTGGCCTAGG TAAACTCGAT
AATGCTGTGG GTTATGTGGC TATTCGTGAT GATCAGTCTG ACTTCACCAC TACAGTAGAT
AAAGATGGTA GTTTAGTACC AGTAGATAAT CGTAAAGGCG ACAATTTCAA GAGCTTTGAT
AAAGGCGTGG TACGTGCTGA TATGGTGAAG CCTGACTCGG TGCTTAAGCC TATTGACGTA
TCACTAAAGC AATCAGGTAG TGTGAAGGTT GATGCTGGAA AAGGTAGTTT TAACCCTACA
TTTAATTATA AATCTGTTTA CGAAAACTTT GACAGTCAAA TGCAAGTAGG TCACGTTTAC
GGTAACTTTG ACTCTGCTGC AGGAGAGGTA TCTCGAGCTA CTAACGTCTA TGTCCAGGGG
TACTTAACTG CTACAGAGGC AATGGATAGG TTGAAAGATA TCAATGAAGG TAAGGCTCAG
TATACAGGAG TAGCGACCTA TATCGAAAAT ATCCATTTAG GAGATAATGC AAATACAGCT
CCTGTGAAAG GCACATCAGC CTTCGATGTT GACTTTGTGA ATAACTCAGT GAAAGGTGAG
CTTGCCTTTG ACGGTAACTT CAAATATATG CCAGAAGGTA ATAAGATTGG TATTGAAGCG
ACCATCGATG GTAATACCTT TGCAGGTAAT GTTAATGGTA TCGATACTGC TGGTGGCTTC
TATGGTGAAG ATGCTAAATT CTTAGGTGGT ATCTATCAAG ATGCGGCAAT CGAAGGTGGT
AAAGGCGACT TACCTGGTAC AGGAACTCGT TTCCAAGGTA CATTCGCAGC TGAAAAACAG
TAA
 
Protein sequence
MSLHCHSNLV VSSAKKLNTP LKPSVVLLTS FIFASVSAYA GTSTKQNTPT NPDVAAQSNL 
TGVQSNAIGK SGLGTSIRYT EILDNESDSY NQLAVRADQV ASKMAKQGPI DIQLTDLNDS
DLENGFKQHS GFTEVVGQDS AGIAPRKRRM DYTTTYKNFD DQMQIGHVHG DLKAPLINVD
EYRLSNVYVQ GNATDEADIE FLQGWAQHHQ DTNLSEGVVQ YTGDATYMEN LHLKDGQQSS
PVVNGTSEFN VDFVKALLEG TLSFQDGDYK YMPEGNKIGI KAGITGNTFK GNNNGIDTAG
SFYGEDGRLL GGIYQQALTP GGEGSAPGEG TTFQGTFGAS KTTKTLDPVA NPDVAVDSNV
TGFHSSALSN DNLIGPSIHY GAIRDNKTGS YDQLSIRANE TDSREYYAAV GVNLTGSEDA
SYGNGFKQHT DETLIELGPI LRRDFEYQSI YKDFDGEMQI GHVLGDPKVR WTIITPGRLS
NVHVQGNATN LTDMQYMKDL AQYKVDSELN DGKVEYKGVA TYMENLHLKD GKRAGPVVDG
TSTFDVDFIN ANLEGELAFN AGDYKYMPEG NKIKIKADIT GNTFAGNLNN IDTAGGFYGE
DAKLLGGVYQ QALTTGGVAK KKGEGTTFQG TFGASKVETR GSNAPSEPEL PTVESDMTGF
QSTTLSSKEK TLPFGLGKLD NAVGYVAIRD DQSDFTTTVD KDGSLVPVDN RKGDNFKSFD
KGVVRADMVK PDSVLKPIDV SLKQSGSVKV DAGKGSFNPT FNYKSVYENF DSQMQVGHVY
GNFDSAAGEV SRATNVYVQG YLTATEAMDR LKDINEGKAQ YTGVATYIEN IHLGDNANTA
PVKGTSAFDV DFVNNSVKGE LAFDGNFKYM PEGNKIGIEA TIDGNTFAGN VNGIDTAGGF
YGEDAKFLGG IYQDAAIEGG KGDLPGTGTR FQGTFAAEKQ