| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1935 |
|---|
| Symbol | leuD |
|---|
| ID | 5204802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2401468 |
|---|
| End bp | 2402118 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640600167 |
|---|
| Product | isopropylmalate isomerase small subunit |
|---|
| Protein accession | YP_001280825 |
|---|
| Protein GI | 148653732 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.217033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTT ATAATACCCA AACTGGCATC GTATGCCCCC TTGATCGCTC GAATGTGGAT
ACCGATCAGA TTATCCCAAA GCAGTTTTTA AAATCTATCA AACGCACAGG TTTTGGCGTC
AATTTATTTG ATGATTGGCG CTATCTGGAT GAAGGCTTCC CAGGCCAAGA CAACTCTAAG
CGTCCGATTA ATCCTGATTT TGTGCTTAAT AAACCACGCT ATCAAGGTGC AACTATTTTG
CTGGCCCGTG ATAACTTCGG CTGTGGCTCA AGCCGTGAAC ATGCACCTTG GGCTTTATCA
GAGTATGGCT TTCGCACCGT AATTGCCCCA AGCTTTGCCG ATATCTTCTA TAACAACTGC
TTTAAAAATG GTATGTTGCC CATTGTATTG ACCGAAGCGC AAGTTGACGA CTTGTTCGAG
CAATGCCTTG CCAACGAAGG CTATGAGTTA ACCGCTGACC TTGAGCGTCA AGTGGTCGTC
ACCCCTGACG GCACAGAGTA TCCGTTTGAG GTTGATGAGT TTCGTAAGCA CTGTTTGTTA
AATGGTCTCG ATGATATCGG TCTTACTTTA CAGCAAAGCG AGGCGATCAA AGCTTATGAG
GCCAAAATGC AGCAAAATAC GCCTTGGATT TTTAAAGAAG TACGTGCCTA A
|
|---|
| Protein sequence | MQAYNTQTGI VCPLDRSNVD TDQIIPKQFL KSIKRTGFGV NLFDDWRYLD EGFPGQDNSK
RPINPDFVLN KPRYQGATIL LARDNFGCGS SREHAPWALS EYGFRTVIAP SFADIFYNNC
FKNGMLPIVL TEAQVDDLFE QCLANEGYEL TADLERQVVV TPDGTEYPFE VDEFRKHCLL
NGLDDIGLTL QQSEAIKAYE AKMQQNTPWI FKEVRA
|
|---|
| |