Gene PsycPRwf_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1933 
Symbol 
ID5204800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2398792 
End bp2400045 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content47% 
IMG OID640600165 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001280823 
Protein GI148653730 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000147149 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACCC CCTCAACAAA TAGTTTAAAA CAGGCAACGT TAAAAACACT CACTGTGGCC 
ATATTAGCGG CGTTGACATT GCCTGTAGCG GCCTATGCTC AAGCTGATAA TGATGTTGTA
CAATCAAATA CTAACACACC ACCACAAGTA ACCAGCATGT CTGAATCTGC TGCAGATCAA
GCCTTAGCTG AGGATACACA GACTGATGAT TTAGATAATG AAGAGGACAT GGCGCAAGCG
GCTGATGACG CTCAAAGTGA CGCTAATGTA GAGGCATCAG GCCCCACTAC CAGTGAATCA
GCGGCTACCC AAGCCACTGC TCAATCAGAT GCTGCCGCTA ATGCGGCAAA AGATACCAGC
TTATCGGCCA TGGCAAAGCA GGTCAACAGT AGCGAGTGGA AGCCGGGCGT GAAGATGACT
CAGGCTGTGG GCGCCAAAGT ACAGGCGTTA TTAAACTGGA ATCAACATGG TGTCGGTGCT
GTCGATGGCT ATTGGGGCAA AAACACCCAA AAAGCGATGC AAGCTTTTCA GCAGGCCCAG
GGGTTACCCG TCACGGATAC TTTGGATCAA AAAACTTGGG AGGCTTTGTT AAAAGGGTCA
GGACAAAATG ACAATCTTGG GCAAAAGCCG GTATTGATTA GCTATACGCT AAAAGATTCA
GATGTCAATA TTAAGACCAC CACGATACCA GCTGGGGTAG AAGCCAAGTC TAAACTTGAA
GGGCTGTATT ATGAAAGCAT TCCTGAAGCA TTGGGTGAAA AATTCCATAT GAGTGTCAGC
TATCTTAAAC AGCTCAATCC CAATGCAAAA TTTGTCACTG GGGAAACTTT GACGGTTTAT
AACCCCGGCC GCGCCAATAC AAAAGCCATT AGTCGGGTAG TGGCAGATAA AAACCAGCAG
ACCTTATATG CTTATGACAA AGACAATAAA CTGGTGGCCA GCTATCCCAC AACCGTAGGC
AGTACGGCAA CGCCTTCACC CACCGGTACC CATAAAGTAA AAGTTAAGGT AAGTGATCCC
AACTACACCC ATACCGATGC CGATGGCAAG CAGACCGTCT TGCCTCCTGG ACCTAATAAC
CCTGTTGGCC GAGTGTGGAT TGGACTGGAT AAACCCTCTT ACGGCATTCA TGGATCACCG
GATCCTGAGC GCATCAGTCG TCAAGCCTCC GCCGGCTGTA TCCGCCTAAC CAACTGGGAC
GCTATGGCAT TATTAAATAC CATTGAAAAT GGCGCGACAG TTGAGTTTAA ATAA
 
Protein sequence
MLTPSTNSLK QATLKTLTVA ILAALTLPVA AYAQADNDVV QSNTNTPPQV TSMSESAADQ 
ALAEDTQTDD LDNEEDMAQA ADDAQSDANV EASGPTTSES AATQATAQSD AAANAAKDTS
LSAMAKQVNS SEWKPGVKMT QAVGAKVQAL LNWNQHGVGA VDGYWGKNTQ KAMQAFQQAQ
GLPVTDTLDQ KTWEALLKGS GQNDNLGQKP VLISYTLKDS DVNIKTTTIP AGVEAKSKLE
GLYYESIPEA LGEKFHMSVS YLKQLNPNAK FVTGETLTVY NPGRANTKAI SRVVADKNQQ
TLYAYDKDNK LVASYPTTVG STATPSPTGT HKVKVKVSDP NYTHTDADGK QTVLPPGPNN
PVGRVWIGLD KPSYGIHGSP DPERISRQAS AGCIRLTNWD AMALLNTIEN GATVEFK