Gene PsycPRwf_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1925 
Symbol 
ID5206847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2392409 
End bp2392891 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content44% 
IMG OID640600157 
ProductGAF domain-containing protein 
Protein accessionYP_001280815 
Protein GI148653722 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000712217 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAA TAAATCCCAT TGATCCAAAC GCTAACAAAG CTGAAAAGTA CCAATTATTA 
TTAAAACAAG CTGAAGCCAT TATCAGTAGC GAAAGTGATT TAATCGCTAA TATGGCCAAC
CTAACGGCGT TGTTAAAAGA TACCTTTAAC TGGTTTTGGA TTGGATTTTA TCGGGTCGAT
AGCAGTGCCA ATCAGCTCAT TCTTGGTCCG TTTCAAGGTC CGCTGGCTTG CACCCGTATC
CCGCATGGTA AGGGCGTATG TGGCGAGGTC TGGGCGACGG GTACCACTCA AATTGTTGAT
GATGTCAATG CGCATCCCAA TCACATCGCC TGCTCCTCCC TATCACAGTC AGAGATTGTG
GTACCGATAA CAGATGAGGC GGGTGAGATT ATCGCAGTAT TAGATATTGA TTCAGATACG
TTAGCCACCT TTGATGAGGT CGATGGAGAG TATCTTCAGC AATTGGTTGA CCTACTAAAA
TAG
 
Protein sequence
MQAINPIDPN ANKAEKYQLL LKQAEAIISS ESDLIANMAN LTALLKDTFN WFWIGFYRVD 
SSANQLILGP FQGPLACTRI PHGKGVCGEV WATGTTQIVD DVNAHPNHIA CSSLSQSEIV
VPITDEAGEI IAVLDIDSDT LATFDEVDGE YLQQLVDLLK