Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1925 |
Symbol | |
ID | 5206847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2392409 |
End bp | 2392891 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640600157 |
Product | GAF domain-containing protein |
Protein accession | YP_001280815 |
Protein GI | 148653722 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000712217 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAA TAAATCCCAT TGATCCAAAC GCTAACAAAG CTGAAAAGTA CCAATTATTA TTAAAACAAG CTGAAGCCAT TATCAGTAGC GAAAGTGATT TAATCGCTAA TATGGCCAAC CTAACGGCGT TGTTAAAAGA TACCTTTAAC TGGTTTTGGA TTGGATTTTA TCGGGTCGAT AGCAGTGCCA ATCAGCTCAT TCTTGGTCCG TTTCAAGGTC CGCTGGCTTG CACCCGTATC CCGCATGGTA AGGGCGTATG TGGCGAGGTC TGGGCGACGG GTACCACTCA AATTGTTGAT GATGTCAATG CGCATCCCAA TCACATCGCC TGCTCCTCCC TATCACAGTC AGAGATTGTG GTACCGATAA CAGATGAGGC GGGTGAGATT ATCGCAGTAT TAGATATTGA TTCAGATACG TTAGCCACCT TTGATGAGGT CGATGGAGAG TATCTTCAGC AATTGGTTGA CCTACTAAAA TAG
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Protein sequence | MQAINPIDPN ANKAEKYQLL LKQAEAIISS ESDLIANMAN LTALLKDTFN WFWIGFYRVD SSANQLILGP FQGPLACTRI PHGKGVCGEV WATGTTQIVD DVNAHPNHIA CSSLSQSEIV VPITDEAGEI IAVLDIDSDT LATFDEVDGE YLQQLVDLLK
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