| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1924 |
|---|
| Symbol | queA |
|---|
| ID | 5206846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2391011 |
|---|
| End bp | 2392183 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640600156 |
|---|
| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| Protein accession | YP_001280814 |
|---|
| Protein GI | 148653721 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
|---|
| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000122166 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC CTCTCTCTCA AGACCAACAT GACAGCTCAA GCAATATGCC TACTGACAAC
GCCGAAACAC AAGGCTATCT CAGTGTTGCT GATTACGATT ATGACCTGCC TGATGAGTAT
ATCGCTCGTT ATCCGCTGGC TGAGCGCAGT GCGTCACGCT TGATGTATTT GCCAGCTCAA
AAAGAAAATA CGGCTGTCAT ACAAGACAGA CAATTTTCTG ACTTGCCTGA GCTATTACAG
GCAGGCGACT TGATAGTGTT TAACGACACT AAGGTGATGA AAGCCCGCTT ATTTGGCCAA
AAAGATACCG GCGGCAAGGT AGAGGTTTTG GTCGAAAGAC TTACCGATGA CACTGAGTTT
ACTACCGATG AGAGCGGACA AAGCTTTGAC AATGTGGCAC TGTGTCATGT GCGTGCCAGC
AAAGCGCCAA AGCTTGGGCA GCGCTTAGTT TTAGGGGATG GCAACATTGA ATGCGTGATG
ATTGGCCGTC ATGAGAACTT ATTTATTTTA AGCTTTAAAA ACCCTATCCT GCCAGACTTA
GAGCAGTATG GCGAGTTGCC AATCCCGCCG TATTTTGAAC GTCATGCCGA TGAAACTGAC
AATGTGCGTT ATCAAACCGT ATTTCATGAC CCGACCAAGC TTGCCAGCGT AGCTGCCCCC
ACCGCAAGCC TACACTTTGA TGATAAAGTA CTCAAGCAGC TGGCCGATAA AGGCATTAAC
ACCGCTTACG TCACCTTACA TGTGGGCGCT GGCACCTTTG CACCGGTCAA GACCGACAAC
CTACTTAATC ACACCATGCA CAGCGAGTAT GCCAATCTGC CGCAAGCCAC CGCGGATCTC
ATTAATCAGA CGCATCAAAA CGGTAATAAA GTAATCGCTA TTGGTACCAC AGTGACTCGT
GTGCTAGAGA CCGCTTACCA AAAGACTGCC GACGAGCACG GCCATATCTC CACGTGGTCT
GGTGATACTG ATATCTTTAT CTACCCTGGC TTTAAATTTG GCGTGATTGA TAAGCTGTTG
ACCAACTTTC ACTTGCCCAA ATCAACGTTA CTCATGCTGG TTTCCGCTTT TGCCGGAAAA
GCCAATATCG AGCAGGCTTA TGAGCATGCG GTTGCCCAAA AATACCGCTT CTTTAGCTAT
GGTGATGCCA TGTTACTTGA ACGTAACCTG TGA
|
|---|
| Protein sequence | MTQPLSQDQH DSSSNMPTDN AETQGYLSVA DYDYDLPDEY IARYPLAERS ASRLMYLPAQ
KENTAVIQDR QFSDLPELLQ AGDLIVFNDT KVMKARLFGQ KDTGGKVEVL VERLTDDTEF
TTDESGQSFD NVALCHVRAS KAPKLGQRLV LGDGNIECVM IGRHENLFIL SFKNPILPDL
EQYGELPIPP YFERHADETD NVRYQTVFHD PTKLASVAAP TASLHFDDKV LKQLADKGIN
TAYVTLHVGA GTFAPVKTDN LLNHTMHSEY ANLPQATADL INQTHQNGNK VIAIGTTVTR
VLETAYQKTA DEHGHISTWS GDTDIFIYPG FKFGVIDKLL TNFHLPKSTL LMLVSAFAGK
ANIEQAYEHA VAQKYRFFSY GDAMLLERNL
|
|---|
| |