Gene PsycPRwf_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1921 
Symbol 
ID5206843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2388473 
End bp2388874 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content38% 
IMG OID640600153 
ProductNUDIX hydrolase 
Protein accessionYP_001280811 
Protein GI148653718 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.11755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAG TAAAAGTAGC GGCAGCAATT ATTATAAATA ACGGCAAAAT ACTATGTGTG 
CAACGAGGGC CTAACAAATT TGACTATATT TCACAAAAGT TTGAGTTCCC TGGAGGAAAA
ATTGAAGCGG GCGAGCTGCC ATCAGATACC GTAGTCAGAG AGATTCATGA AGAGTTAAAA
ATGAATATTT CTGTCGAAGA AGACTTTTTA GTCGTTAATC ATGAGTACCC CGACTTTAAG
ATTCAAATGC ATTCTTTTAT CTGTTCTACG CCAACGAGAG AGCTTGAGCT ATCAGAGCAC
ATATCATTTA AATGGTTAGA TGTTAGTGAG CTTGAAGCTT TAGATTGGGC AGCAGCTGAT
CTTCCCATTG TTGATCGGCT GATTAAGGAA TTAGACCAAT GA
 
Protein sequence
MKQVKVAAAI IINNGKILCV QRGPNKFDYI SQKFEFPGGK IEAGELPSDT VVREIHEELK 
MNISVEEDFL VVNHEYPDFK IQMHSFICST PTRELELSEH ISFKWLDVSE LEALDWAAAD
LPIVDRLIKE LDQ