Gene PsycPRwf_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1907 
Symbol 
ID5206211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2368742 
End bp2370487 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content47% 
IMG OID640600138 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_001280797 
Protein GI148653704 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAT CTCAAACTGC CCCACGTACT AAAGCACAAA GCATTGAACG TAATGAGCGC 
CAATACCAAG TGGGCGTACT AAAAAGATAT GGCCTATTAA TAGGTGTCTC ATTAATTACT
GTTATTGCCG TGTTATTGTC GATTTGGTGG TTGGCCCTTT TGGCTGGTGT GCTGGTCATG
GTCGGTATCT ATGACTTATT ACAATCCAAA CATGCCGTGC TATACAACTA CCCTATTGCC
GGTCATATCC GCTACTTTTT GGAAAGCTAT CGCCCTGAGA TTCGCCAGTA CTTTATTGAA
AATGACAAAG AGGAAGTGCC TTTTTCACGC CAGCAGCGCG CCTTGGTCTA TCAGCGTGCT
AAGAATGTCA GTGATACCAA TGCATTTGGT ACGCTAGATG ACTTATATAC TCAAGGCAAA
GAGTGGTTTT TACAATCTCA AACCAGCCAC CCTCTAGATG TAGAGGATTT TCGCATTATC
GTGGGGAATG AGCACTGTAA ACAGCCTTAT TCTATGTCGG TATTTAACAT CTCAGCGATG
AGCTTTGGTA GTCTATCAGG CAATGCGATT ATGGCATTGA ACCAAGGCGC TAAAATGGGC
GGCTTCGCTC ATGATACCGG AGAGGGCGCC ATCAGTCCTT ATCACCGCAA GTTTGGTGGC
GATCTAATTT GGGAGCTGGG TACGGGCTAC TTTGGCTGCC GTGATGATCA CGGTAACTTT
AATCCAGAGC TGTTTGAGAT GCATGCCAAA GAAGATCAGG TAAAAATGAT TGAGGTTAAA
TTATCTCAAG GCGCCAAACC AGGCAAAGGC GGTGTCTTAC CGGCCGAAAA GATTACAGAA
GAGATTGCCC AAACTCGCCG CATCCCAATG GGAGAAGACT GTGTATCCCC CTCTACCCAC
TCAGCCTTTA GTACCCCGCG CGAGCTGGTT CATTTTTTAC AGCAGCTGCG TGAGTTATCT
GGTGGTAAGC CTGTGGGCTT TAAGCTATGT ATTGGTCAGC CTTGGCAGTT TATGGCAATA
GTCAAGGCCA TGATTGAAGA GGACAACTAT CCTGACTTTA TCGTGGTAGA TGGCGCAGAA
GGTGGTACGG GTGCTGCTCC TGTAGAGTTT ATGGACAGTG TGGGTATGCC ATTAATTGAC
GGCTTTTTAT TTGTACACAA CACCCTAGTG GGCGCAGGTA TTCGTGATAA AATAAAAATC
GGTGTCAGTG GTAAGATTGT CTCAGCCTTT GATATTGCCA AAATGTTGGC ACTGGGGGCA
GACTGGTGTA ACTCGGCGCG CGGCTTTATG TTCGCAGTCG GCTGTATCCA ATCTCGCTCT
TGTCATACCA ACACCTGTCC GACCGGTGTG GCAACCCAAG ATCCGTATCG CGAAAAAGCA
CTGGACGTGC CCAGCAAGTC TGAACGTGTG GCAAGCTTCC ATAAAAACAC GCTAAAATCA
CTGTCCAACT TCGTCGGCGC TGTGGGTCTA TCGCATCCTT ACGACTTACA CCCTTATCAT
GTGGCACGTC GTATGGATGA TGGCTCCATC AAGCTATTGT CTAGATGCTT TTACTTTATA
GATGAAGGGG CATTATTGAC CATGAATGCC CGTTCAGAGA TTTATAATCA GATGTGGGTA
ATGGCAGATC CCGATAGCTT CAAAGCCGAT AACGAAGCCT ATATTGCTTA TAATGAAGAC
TCACGTCACA CCCATAAAAA TGCGGCGGTG GACACTGAGC ACTTAGTATT CCCAACCGAT
ATGTAA
 
Protein sequence
MPQSQTAPRT KAQSIERNER QYQVGVLKRY GLLIGVSLIT VIAVLLSIWW LALLAGVLVM 
VGIYDLLQSK HAVLYNYPIA GHIRYFLESY RPEIRQYFIE NDKEEVPFSR QQRALVYQRA
KNVSDTNAFG TLDDLYTQGK EWFLQSQTSH PLDVEDFRII VGNEHCKQPY SMSVFNISAM
SFGSLSGNAI MALNQGAKMG GFAHDTGEGA ISPYHRKFGG DLIWELGTGY FGCRDDHGNF
NPELFEMHAK EDQVKMIEVK LSQGAKPGKG GVLPAEKITE EIAQTRRIPM GEDCVSPSTH
SAFSTPRELV HFLQQLRELS GGKPVGFKLC IGQPWQFMAI VKAMIEEDNY PDFIVVDGAE
GGTGAAPVEF MDSVGMPLID GFLFVHNTLV GAGIRDKIKI GVSGKIVSAF DIAKMLALGA
DWCNSARGFM FAVGCIQSRS CHTNTCPTGV ATQDPYREKA LDVPSKSERV ASFHKNTLKS
LSNFVGAVGL SHPYDLHPYH VARRMDDGSI KLLSRCFYFI DEGALLTMNA RSEIYNQMWV
MADPDSFKAD NEAYIAYNED SRHTHKNAAV DTEHLVFPTD M