Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1907 |
Symbol | |
ID | 5206211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2368742 |
End bp | 2370487 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600138 |
Product | ferredoxin-dependent glutamate synthase |
Protein accession | YP_001280797 |
Protein GI | 148653704 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAT CTCAAACTGC CCCACGTACT AAAGCACAAA GCATTGAACG TAATGAGCGC CAATACCAAG TGGGCGTACT AAAAAGATAT GGCCTATTAA TAGGTGTCTC ATTAATTACT GTTATTGCCG TGTTATTGTC GATTTGGTGG TTGGCCCTTT TGGCTGGTGT GCTGGTCATG GTCGGTATCT ATGACTTATT ACAATCCAAA CATGCCGTGC TATACAACTA CCCTATTGCC GGTCATATCC GCTACTTTTT GGAAAGCTAT CGCCCTGAGA TTCGCCAGTA CTTTATTGAA AATGACAAAG AGGAAGTGCC TTTTTCACGC CAGCAGCGCG CCTTGGTCTA TCAGCGTGCT AAGAATGTCA GTGATACCAA TGCATTTGGT ACGCTAGATG ACTTATATAC TCAAGGCAAA GAGTGGTTTT TACAATCTCA AACCAGCCAC CCTCTAGATG TAGAGGATTT TCGCATTATC GTGGGGAATG AGCACTGTAA ACAGCCTTAT TCTATGTCGG TATTTAACAT CTCAGCGATG AGCTTTGGTA GTCTATCAGG CAATGCGATT ATGGCATTGA ACCAAGGCGC TAAAATGGGC GGCTTCGCTC ATGATACCGG AGAGGGCGCC ATCAGTCCTT ATCACCGCAA GTTTGGTGGC GATCTAATTT GGGAGCTGGG TACGGGCTAC TTTGGCTGCC GTGATGATCA CGGTAACTTT AATCCAGAGC TGTTTGAGAT GCATGCCAAA GAAGATCAGG TAAAAATGAT TGAGGTTAAA TTATCTCAAG GCGCCAAACC AGGCAAAGGC GGTGTCTTAC CGGCCGAAAA GATTACAGAA GAGATTGCCC AAACTCGCCG CATCCCAATG GGAGAAGACT GTGTATCCCC CTCTACCCAC TCAGCCTTTA GTACCCCGCG CGAGCTGGTT CATTTTTTAC AGCAGCTGCG TGAGTTATCT GGTGGTAAGC CTGTGGGCTT TAAGCTATGT ATTGGTCAGC CTTGGCAGTT TATGGCAATA GTCAAGGCCA TGATTGAAGA GGACAACTAT CCTGACTTTA TCGTGGTAGA TGGCGCAGAA GGTGGTACGG GTGCTGCTCC TGTAGAGTTT ATGGACAGTG TGGGTATGCC ATTAATTGAC GGCTTTTTAT TTGTACACAA CACCCTAGTG GGCGCAGGTA TTCGTGATAA AATAAAAATC GGTGTCAGTG GTAAGATTGT CTCAGCCTTT GATATTGCCA AAATGTTGGC ACTGGGGGCA GACTGGTGTA ACTCGGCGCG CGGCTTTATG TTCGCAGTCG GCTGTATCCA ATCTCGCTCT TGTCATACCA ACACCTGTCC GACCGGTGTG GCAACCCAAG ATCCGTATCG CGAAAAAGCA CTGGACGTGC CCAGCAAGTC TGAACGTGTG GCAAGCTTCC ATAAAAACAC GCTAAAATCA CTGTCCAACT TCGTCGGCGC TGTGGGTCTA TCGCATCCTT ACGACTTACA CCCTTATCAT GTGGCACGTC GTATGGATGA TGGCTCCATC AAGCTATTGT CTAGATGCTT TTACTTTATA GATGAAGGGG CATTATTGAC CATGAATGCC CGTTCAGAGA TTTATAATCA GATGTGGGTA ATGGCAGATC CCGATAGCTT CAAAGCCGAT AACGAAGCCT ATATTGCTTA TAATGAAGAC TCACGTCACA CCCATAAAAA TGCGGCGGTG GACACTGAGC ACTTAGTATT CCCAACCGAT ATGTAA
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Protein sequence | MPQSQTAPRT KAQSIERNER QYQVGVLKRY GLLIGVSLIT VIAVLLSIWW LALLAGVLVM VGIYDLLQSK HAVLYNYPIA GHIRYFLESY RPEIRQYFIE NDKEEVPFSR QQRALVYQRA KNVSDTNAFG TLDDLYTQGK EWFLQSQTSH PLDVEDFRII VGNEHCKQPY SMSVFNISAM SFGSLSGNAI MALNQGAKMG GFAHDTGEGA ISPYHRKFGG DLIWELGTGY FGCRDDHGNF NPELFEMHAK EDQVKMIEVK LSQGAKPGKG GVLPAEKITE EIAQTRRIPM GEDCVSPSTH SAFSTPRELV HFLQQLRELS GGKPVGFKLC IGQPWQFMAI VKAMIEEDNY PDFIVVDGAE GGTGAAPVEF MDSVGMPLID GFLFVHNTLV GAGIRDKIKI GVSGKIVSAF DIAKMLALGA DWCNSARGFM FAVGCIQSRS CHTNTCPTGV ATQDPYREKA LDVPSKSERV ASFHKNTLKS LSNFVGAVGL SHPYDLHPYH VARRMDDGSI KLLSRCFYFI DEGALLTMNA RSEIYNQMWV MADPDSFKAD NEAYIAYNED SRHTHKNAAV DTEHLVFPTD M
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