| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1904 |
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| Symbol | |
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| ID | 5206208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2364985 |
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| End bp | 2365803 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600135 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_001280794 |
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| Protein GI | 148653701 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA GCAGGCAGCA GTATGGCTTT AACTCATCGA GTGCCCATAG TAGGTTGCGC
CTGACGCACT TTAGATTGAC CCGTTTGTGT TATGCAAGCT TGCTGCTTAG CGTACCGCTT
TTAATGATAG GCTGCCAGTC TATCGGCTCA GTGACAGGCA TAAATGGGCC TGCTCATAGT
GCGCCAACTG CGAGTAGGCA AGTGGCCGAC ATAAGAACAC AGATGGCGGC GCAGTATTTA
AATACAGGCC AGTTAGATGC CGCACAGCGC CAGCTTAATA GAGCGCTTGA GGCGGATAAG
GCGTATGCGC CCGCTTATGA TATGCAGGCA CTGCTACTAC AGCGTGAGGG CAGTGCGCAC
AATTGGGCTC AGGCAGACAG CTTTTTTCGT CAAGCGATCA AGCATGACCC AAGCTTTATG
CCGGCGCATA ATAACTATGG GGTGTATTTG TCCCAAAGTG GCCAGTATCA AGCGGCGCTG
GCGCAATTTA AAATAGCTGG CTTAGCCTTA GGGTATGAGG GACGTATAAA GGCGTTACAA
AACCTAGGCC TTACTGCACG GCAGCTTGGC GACACCCAAT TGGCCAGCCA AGCTTGGGTG
CAAGTACTTG AGCTTGATCG CGGCAATGTT AGTGCACATT TAGAGTTGGT TGATCTCTTA
TTAGACAGTG GTGAGGTGGC TTATGCCCAA AATTTGTATA ATGAGATGCA TCTGCAGCTA
GGTGACGACG CCCAAACCCC TCGTATGATA AGACAAGGGG TTAGGCTTAA AGCACTACAA
GATACAATCG GAATACCTAT AAAACCGGCA GTAAGATAA
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| Protein sequence | MTTSRQQYGF NSSSAHSRLR LTHFRLTRLC YASLLLSVPL LMIGCQSIGS VTGINGPAHS
APTASRQVAD IRTQMAAQYL NTGQLDAAQR QLNRALEADK AYAPAYDMQA LLLQREGSAH
NWAQADSFFR QAIKHDPSFM PAHNNYGVYL SQSGQYQAAL AQFKIAGLAL GYEGRIKALQ
NLGLTARQLG DTQLASQAWV QVLELDRGNV SAHLELVDLL LDSGEVAYAQ NLYNEMHLQL
GDDAQTPRMI RQGVRLKALQ DTIGIPIKPA VR
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