| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1902 |
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| Symbol | ispG |
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| ID | 5206206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2362779 |
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| End bp | 2363927 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600133 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001280792 |
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| Protein GI | 148653699 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0243178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGTC AACTGAGAAG TCTTATGTCA ACTCCCTCTC CAATAAAACG TCGTCAAACC
AAAAAAATCT ATGTCGGTGA TGTGGCAGTC GGTGGAGATG CCCCCATTAG CGTACAAAGC
ATGACCAATA CGGACACCTG TGATGTGGAT GCTACAGTCG CGCAGATTGA GCGCTGTGTG
GATGCAGGAG CCGATATGAT GCGTATCTCA ACACCGACCA TGGACACGGT AGCTGCCTTT
GCCGAAATCA AAAAGCGGGT CAATATCCCT TTGATTGCTG ATGTGCATTT TGATTATAAG
ATTGCATTGG CTGTGGCGGC AGCGGGTGCA GACTGCTTGC GCATTAACCC AGGCAATATT
GGTAATGATG CCAAAGTGCG CGAAGTGGTG GCCTGTGCCC GTGATTACAA TATTCCCATT
CGTATCGGAG TCAATGCCGG TTCATTAGAA AAAGAGATTC AGCGCAAATA CACCGAGCCT
ACCGGTGAGG CCATGGTCGA GTCGGCCATG CGTCACATTG ACATCTTAGA TCGCTTAAAC
TTCGATCAAT ATAAGGTATC GGTGAAGGCC AGTAATGTGT TTTTAACTTT AGATGCTTAT
CGTTTGTTAT CGCAACAAAT TGATAATCCA CTACATCTAG GCGTAACCGA GGCAGGTGTT
TATCGTACCG GTACGGTCAA ATCTGCCATT GCTCTAGGCG GTTTGTTATT AGACGGCATC
GGCGACACCA TCCGCATTTC ATTGGCAGCC GAGCCTGAAG ATGAAATTAA AATTGGCTTT
GATATTCTAA AGTCACTTAA TATTCGTGCC AACGGCATTA ACTTTATTGC CTGTCCCAGC
TGTTCACGCC AAGAGTTCGA TGTGATTCGG GTGATGAATC AGTTAGAGGC CCGTTTAGAA
GATGTACGGG TGCCGATGGA TGTGTCGGTT ATCGGCTGTA AGGTGAATGG GCCTGGTGAA
GCCAAAGAGG CAGATATCGG GGTGGTGGGT GCATCCCCCA ATTCACTGGT GTATTTGCAA
GGTGAGAAGA GCCACCTCAT TGATACCAAT ACCTTGGTAG ATAATATCGA AAAAATGGTA
CGTGAGCGTG TGGCGGCGGC CGAAAAACAA GCTGCCAATG AAATCCTACG CGTCGATGGT
AGCCAGTAG
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| Protein sequence | MSSQLRSLMS TPSPIKRRQT KKIYVGDVAV GGDAPISVQS MTNTDTCDVD ATVAQIERCV
DAGADMMRIS TPTMDTVAAF AEIKKRVNIP LIADVHFDYK IALAVAAAGA DCLRINPGNI
GNDAKVREVV ACARDYNIPI RIGVNAGSLE KEIQRKYTEP TGEAMVESAM RHIDILDRLN
FDQYKVSVKA SNVFLTLDAY RLLSQQIDNP LHLGVTEAGV YRTGTVKSAI ALGGLLLDGI
GDTIRISLAA EPEDEIKIGF DILKSLNIRA NGINFIACPS CSRQEFDVIR VMNQLEARLE
DVRVPMDVSV IGCKVNGPGE AKEADIGVVG ASPNSLVYLQ GEKSHLIDTN TLVDNIEKMV
RERVAAAEKQ AANEILRVDG SQ
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