Gene PsycPRwf_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1897 
Symbol 
ID5204632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2356730 
End bp2357695 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID640600128 
Productalpha/beta hydrolase-like protein 
Protein accessionYP_001280787 
Protein GI148653694 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.249943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAT CTCTTGAGAA AACCACCAAT ATTAACGATT TAAAGCACCA AGCCGTCAAT 
ACCACTGACT CAAACTCACC CAGCACCTTA ATCATTATGA CGGAGCGTAA TCAGCCACTT
ACCGCCACAC TGTATTTGCC TGAGCAGACC TTAGCTGATG ACATCAAAAA CGCCATTATG
ATAGCGCCAG CCACCGGCAT TAAACGCTGG TTTTATAACA GCTTTGCCAC CTATCTTGCC
AGTCAAGGCT TTGGGGTGAT TACTTATGAC AATGAAGGCA TTGGTGACTC ATTAACCTCT
GCGCTCTCTA AATGTGATGC GTCATTAATC AGCTGGGGAC GTCACGATGC CACCGCCGTA
CTAGATGCCT TGCAGCAACA ATTTCCAAAC GCCAAATACC ATCTGGTGGG TCACAGTGCA
GGCGGTCAAC TTATTGGCTT AATGCCCAAT TATCAAGCAC TGTCCTCTGT ATTCAACGTG
GCCTGCTCCT CAGGCCGTAT TAAGAATATG GAGCTGCCTT TTAAGGCACA AGCTATGGTC
TTTATGGACG CCGCCATTCC GCTAGGCAAT CTTATCTTGG GCTACACGCC CTCTGATAAA
TTTAATATGG GTGAGCCACT GCCGCGTGGT GTCGCCAAGC AGTGGCGTGA TTGGTGTAAT
GGCAAAGGCT ATATCAAGAC CGCCTTTGGC AAAACTGTAT TTACCCATTA TTATGATGAA
TTAGATACCC CCTCACTATG GCTTAACTTC ACCGATGATG ACATTGCCAA TGCCAAAAAC
GTGGACGATA TGCTCGCTGT ATTTACAGCC ATGCCAGCCA AAAAACGTAT GATAAGCCCC
AAGGAATTTG GCTTAAACCA CATCGGCCAT ATGAAATACT TTAGCAGTAA AACCCATGCT
AAAGCGCCCA AGCTTTGGCA AATGGCAACC GACTGGATTG TAGAGCATGG TGATTTATCA
GCTTAG
 
Protein sequence
MSTSLEKTTN INDLKHQAVN TTDSNSPSTL IIMTERNQPL TATLYLPEQT LADDIKNAIM 
IAPATGIKRW FYNSFATYLA SQGFGVITYD NEGIGDSLTS ALSKCDASLI SWGRHDATAV
LDALQQQFPN AKYHLVGHSA GGQLIGLMPN YQALSSVFNV ACSSGRIKNM ELPFKAQAMV
FMDAAIPLGN LILGYTPSDK FNMGEPLPRG VAKQWRDWCN GKGYIKTAFG KTVFTHYYDE
LDTPSLWLNF TDDDIANAKN VDDMLAVFTA MPAKKRMISP KEFGLNHIGH MKYFSSKTHA
KAPKLWQMAT DWIVEHGDLS A