Gene PsycPRwf_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1889 
Symbol 
ID5206553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2346657 
End bp2347322 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content46% 
IMG OID640600120 
Productcytochrome c, class I 
Protein accessionYP_001280779 
Protein GI148653686 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TGCTCGTTGC CACCAGCCTA TGTATTGCCA GTATCAGCGC CAGCGCAGCC 
CTTATTGTCC CTAAATATGA TGTTGCGGCA GGTCAAAAAA TTGTTGAAAA CAACTGCGCT
GCCTGTCATG GTATGACTGG CGTTAGTGTT GTGCCTACTC AGCCAAACTT GGGTGGCCAA
AATGTGCGTT ATTTGTTTAA ACAGTTAAGA GATTTTAAAA CCGGATATCG TGTTAACGGT
ATCATGCAGG CACAGATTTC TGCTTTGTCT GAGCAGGATT TAGCCAACGT AGCAGGTTAT
TTCTCACAGC AAAAACCTTG GGGTGCTTTC GCGGGTAACC CAGCAACTGC CGCTGAAGGT
AGCAAGCTGT TCTTAGGCGG TGATAAAAAG CGCGGCGTTA TTGCTTGTGC TGGTTGTCAT
GATCCTAAAG GCTTAGGTAA TGGTTATGCA GGCTTCCCAC GTATTGGTGG TCAGCATCCA
GAATACTTAG GCATTCAGCT TAAAGCGTTC CGTGCAGCAG GTCGTGAAGA TGATGTAACA
CGTGATCAAA AGCGTATTAA CGACTCAGCC AAAGAGGGTG ACAAAGGCAT GATGCAGGTT
GTGGCCTCTC GACTGTCTGA CCGTGATATC AAAGTATTGT CACAGTTCAT TGGTGCGGTT
CACTAA
 
Protein sequence
MKKLLVATSL CIASISASAA LIVPKYDVAA GQKIVENNCA ACHGMTGVSV VPTQPNLGGQ 
NVRYLFKQLR DFKTGYRVNG IMQAQISALS EQDLANVAGY FSQQKPWGAF AGNPATAAEG
SKLFLGGDKK RGVIACAGCH DPKGLGNGYA GFPRIGGQHP EYLGIQLKAF RAAGREDDVT
RDQKRINDSA KEGDKGMMQV VASRLSDRDI KVLSQFIGAV H