Gene PsycPRwf_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1886 
Symbol 
ID5206550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2344377 
End bp2344751 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content42% 
IMG OID640600117 
ProductSmpA/OmlA domain-containing protein 
Protein accessionYP_001280776 
Protein GI148653683 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAT TAAAACACTT ACTTTATCCT ATCGCTCTTA CTGCTACTTT GACACTGACC 
GGTTGTTCTT GGTTTAGCGT ATATACCATT GACCTGCCTC AGGGCACTCC GATCACTCAA
AGCCAAGCCC AGCAAATCCA ACCTGGCATG ACAAAAAACC AAGTGCTTTA CTACATCGGT
AGTCCCGCCA TGCGTGACTC ACTTGCGCCA AATCGTTGGG ATTACATCTA TGATTATAAG
CCAGGCACTT ACGGTAAACG TGAAGGCAAA CAAATAATCA AAAATGCCAG TCAACATCTT
ATCATTTATT TCGATGATGC CGATACTGTT ATAAAAGTAG AGGGTGTTGA GAGCTTACCA
CAAACCAAGC CATAA
 
Protein sequence
MNILKHLLYP IALTATLTLT GCSWFSVYTI DLPQGTPITQ SQAQQIQPGM TKNQVLYYIG 
SPAMRDSLAP NRWDYIYDYK PGTYGKREGK QIIKNASQHL IIYFDDADTV IKVEGVESLP
QTKP