Gene PsycPRwf_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1878 
Symbol 
ID5204699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2336905 
End bp2337561 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID640600109 
Producthypothetical protein 
Protein accessionYP_001280768 
Protein GI148653675 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.781964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG ATATTTCAGG CTGGAACGAA TGGTCAAAAG TGTTTGCCGA TTGGACCGAT 
GTCAGCATAA GTGAGCTGCA CGGGCTGATG ACTGGCCTGA TGACAGTGTG TCATGCGCCC
AGTAAGATTG AGGACTGGGA GCAGCTATTA ACCGAGCTAA GCTTCTCTAT TCCAGATGAA
GCGGCACTGA CCTTATTGGC CGAAGAAGCA GAAGACACCT CTTTTCAGTT AAAAGACAAA
GATGACGCTT ATCAATACTC ACCCTTAGTG CCAGATGACG AACATGACTT ATATGAGCGA
GTGATGGCTC TTAAGCAGTG GGCTAACGGC TTTATGACCG GATTTGGGGT GACAGACTGC
ACCTTAAGCG CTGAGGAGAC GGTGATGTTC TCAGATCTGG CAAAAATTGG CAGCATCCGT
ATTGAGCCTG ATGATGAGTT TGAAGGCGGC GAGGAGTCGT ATTTATATTT ATATGAGTTT
GTGCGCATGG TGCCAGTCAG CTTAGCGATT CGCCCTCGCA AAGCTATGAT GAGCCTGCCA
CTAATTGCAG GTCTATCCCC CGATGCCAAG ACGGCTAAAG AGCTTGAGCA GCAAGGTGTC
AAGCCTAAGC CTATGCCACC GGTGATTGAT ATTATGAATC AAAACCGTCC CTCTTAA
 
Protein sequence
MNDDISGWNE WSKVFADWTD VSISELHGLM TGLMTVCHAP SKIEDWEQLL TELSFSIPDE 
AALTLLAEEA EDTSFQLKDK DDAYQYSPLV PDDEHDLYER VMALKQWANG FMTGFGVTDC
TLSAEETVMF SDLAKIGSIR IEPDDEFEGG EESYLYLYEF VRMVPVSLAI RPRKAMMSLP
LIAGLSPDAK TAKELEQQGV KPKPMPPVID IMNQNRPS