Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1878 |
Symbol | |
ID | 5204699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2336905 |
End bp | 2337561 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640600109 |
Product | hypothetical protein |
Protein accession | YP_001280768 |
Protein GI | 148653675 |
COG category | [S] Function unknown |
COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.781964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACG ATATTTCAGG CTGGAACGAA TGGTCAAAAG TGTTTGCCGA TTGGACCGAT GTCAGCATAA GTGAGCTGCA CGGGCTGATG ACTGGCCTGA TGACAGTGTG TCATGCGCCC AGTAAGATTG AGGACTGGGA GCAGCTATTA ACCGAGCTAA GCTTCTCTAT TCCAGATGAA GCGGCACTGA CCTTATTGGC CGAAGAAGCA GAAGACACCT CTTTTCAGTT AAAAGACAAA GATGACGCTT ATCAATACTC ACCCTTAGTG CCAGATGACG AACATGACTT ATATGAGCGA GTGATGGCTC TTAAGCAGTG GGCTAACGGC TTTATGACCG GATTTGGGGT GACAGACTGC ACCTTAAGCG CTGAGGAGAC GGTGATGTTC TCAGATCTGG CAAAAATTGG CAGCATCCGT ATTGAGCCTG ATGATGAGTT TGAAGGCGGC GAGGAGTCGT ATTTATATTT ATATGAGTTT GTGCGCATGG TGCCAGTCAG CTTAGCGATT CGCCCTCGCA AAGCTATGAT GAGCCTGCCA CTAATTGCAG GTCTATCCCC CGATGCCAAG ACGGCTAAAG AGCTTGAGCA GCAAGGTGTC AAGCCTAAGC CTATGCCACC GGTGATTGAT ATTATGAATC AAAACCGTCC CTCTTAA
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Protein sequence | MNDDISGWNE WSKVFADWTD VSISELHGLM TGLMTVCHAP SKIEDWEQLL TELSFSIPDE AALTLLAEEA EDTSFQLKDK DDAYQYSPLV PDDEHDLYER VMALKQWANG FMTGFGVTDC TLSAEETVMF SDLAKIGSIR IEPDDEFEGG EESYLYLYEF VRMVPVSLAI RPRKAMMSLP LIAGLSPDAK TAKELEQQGV KPKPMPPVID IMNQNRPS
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