| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1875 |
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| Symbol | |
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| ID | 5204696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2333189 |
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| End bp | 2334661 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600106 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001280765 |
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| Protein GI | 148653672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTA CTTTATTTGA CCCCAAATCT ATCGCTGTCT CAAATCCAGT CGATACCTCA
ACTCAAGCCA GCTTGGCGCA TGCCAGCCAG CCTACGGGAC AAGCCAAAAA GAAAGTTTAT
ATTGCCACCC AAGGCTGTCA AATGAACGTT TATGATTCAG AAAAAATGGG TAACGTTCTA
GGCGACTCCC ATGACATGGT GGTTACTGAT AATATCGAAG AGGCCGATGT GTTGCTCATG
AACACCTGCT CCATTCGTGA AAAAGCCCAA GAAAAAGTAT TCTCTGAGCT TGGCCGCTGG
CGTAAGTTAA AAGAAGAAAA ACCAGATTTG GTTATCGGTG TGGGCGGCTG CGTGGCCTCT
CAAGAAGGTG ACAATATCCA AAAAAGAGCC CCTTATGTGG ATATGGTATT TGGCCCACAA
ACCTTACACA GATTGCCCGA GCTATATGAT AAATCGACAA CTCAGCGCAA TGTCAAACCC
AAAGATCGTA TTGGTACGGT CGATGTGTCA TTCCCAAGTA TTGAAAAATT TGACTTCTTG
CCTGAGCCAA AAGTAGAAGG CTACCGTGCC TTTGTTTCTA TCATGGAAGG CTGCTCAAAG
TACTGCTCAT TTTGCGTCGT GCCTTATACC CGTGGTGAGG AGCTGTCACG TCCTTTAGAT
GACGTATTGG CTGAGATTGA TAGCCTCGCT GAGCAAGGCG TGCGCGAGAT CACCTTATTG
GGCCAGAACG TCAATGGCTA TCGCGGTGAA AAAGACGATG GCAGCATCTG CCGCTTTGCT
GAGCTGCTAC ACTATGTGGC CCACGTGGAT GGTATTGAAC GTATTCGTTA CACCACCAGC
CACCCGCTTG AATTCACTGA TGACATCATT GAAGCTTATG CTAAATTGCC GCAATTGGTA
TCGCATCTGC ATCTTCCGGT ACAAAGTGGC TCCAACAAAA TCTTGGCGGC CATGAAACGC
AATCACACCA TTGATGTTTA TATCAATCAG ATTAATAAGC TGATGGCTGT GCGCCCTGAT
ATGCACTTAT CAAGTGACTT TATCATTGGC TTCCCTGGAG AGACAGAAGA GGACTTCTTA
GACACCTTAA ATTTAGCCAA AGCGTTAGAT TTTGATCACT CATATAGCTT TATCTACTCA
AAACGTCCGG GCACACCGGC TTCAGAGTTA CCAGACGATG TGAGCTTGGC GACCAAAAAG
GAGCGTTTGG CCATTTTCCA AAAAGTCATT CGTGATTCAA CGCTTAAGAA AACCGAAGAA
ATGGTGGGCA AAACTCTACG AGTAATGGTT GAGGAGATTG CCGATCGTTA TCCCGATCAA
TTGCTGGGTA CAGCAGACAA CACACGCTCA GTACTGTTTA AAGCCACTGA GCAGCAAAAA
ACAGACTTGA TGGGTAAATT TGTGACGGTC AAAATCACTG ACTTTGTAAG CCCGCATATG
GTACGTGGTG AGTTGGTGGA TATCTTAGAT TAG
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| Protein sequence | MSATLFDPKS IAVSNPVDTS TQASLAHASQ PTGQAKKKVY IATQGCQMNV YDSEKMGNVL
GDSHDMVVTD NIEEADVLLM NTCSIREKAQ EKVFSELGRW RKLKEEKPDL VIGVGGCVAS
QEGDNIQKRA PYVDMVFGPQ TLHRLPELYD KSTTQRNVKP KDRIGTVDVS FPSIEKFDFL
PEPKVEGYRA FVSIMEGCSK YCSFCVVPYT RGEELSRPLD DVLAEIDSLA EQGVREITLL
GQNVNGYRGE KDDGSICRFA ELLHYVAHVD GIERIRYTTS HPLEFTDDII EAYAKLPQLV
SHLHLPVQSG SNKILAAMKR NHTIDVYINQ INKLMAVRPD MHLSSDFIIG FPGETEEDFL
DTLNLAKALD FDHSYSFIYS KRPGTPASEL PDDVSLATKK ERLAIFQKVI RDSTLKKTEE
MVGKTLRVMV EEIADRYPDQ LLGTADNTRS VLFKATEQQK TDLMGKFVTV KITDFVSPHM
VRGELVDILD
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