Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1854 |
Symbol | |
ID | 5205866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2307498 |
End bp | 2307968 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640600085 |
Product | membrane protein-like protein |
Protein accession | YP_001280744 |
Protein GI | 148653651 |
COG category | [S] Function unknown |
COG ID | [COG3305] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.368147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000187157 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGACTGAGT CGCCACAGGT AAGTGGCTCT ATTAAAGCCG TTACCTTATA TGAGGTGGTC AAAGGTGTCG GGGCAGTATT GGCTGCCCTT GCTTTATGGG CGTGGCACAG TGATGTGACA GACTTTATTA GCTTGGCTAA CACGGCTTGG GTTGAGCGCT TTGGTACCTT GTTTAGTGTA CAGGTGGCTG CACTGACTCA AGCGGCACAT CAGGCCTCCC AAAACTGGCA TATTTTTACC TTGATTATCC TAGGGTATGC CAGTTTACGC TTTATTGAGG CGTATGGTTT ATGGAAAGAC AAGACTTGGG CGTATTGGTA TAGCGTACTC GGCTATGGGA TATTTATCCC TGTTGAGGTG TATTATCTGA TTGTGCGCCC CTTTGACTGG ATCAAGCTTG GGGTGTTGCT GCTCAACGTG GTGGTGGTCA TCGTAGTATA TAAGCAGATG CGCCGCAAAG GCCTCCTGTA A
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Protein sequence | MTESPQVSGS IKAVTLYEVV KGVGAVLAAL ALWAWHSDVT DFISLANTAW VERFGTLFSV QVAALTQAAH QASQNWHIFT LIILGYASLR FIEAYGLWKD KTWAYWYSVL GYGIFIPVEV YYLIVRPFDW IKLGVLLLNV VVVIVVYKQM RRKGLL
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