Gene PsycPRwf_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1854 
Symbol 
ID5205866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2307498 
End bp2307968 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID640600085 
Productmembrane protein-like protein 
Protein accessionYP_001280744 
Protein GI148653651 
COG category[S] Function unknown 
COG ID[COG3305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.368147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000187157 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACTGAGT CGCCACAGGT AAGTGGCTCT ATTAAAGCCG TTACCTTATA TGAGGTGGTC 
AAAGGTGTCG GGGCAGTATT GGCTGCCCTT GCTTTATGGG CGTGGCACAG TGATGTGACA
GACTTTATTA GCTTGGCTAA CACGGCTTGG GTTGAGCGCT TTGGTACCTT GTTTAGTGTA
CAGGTGGCTG CACTGACTCA AGCGGCACAT CAGGCCTCCC AAAACTGGCA TATTTTTACC
TTGATTATCC TAGGGTATGC CAGTTTACGC TTTATTGAGG CGTATGGTTT ATGGAAAGAC
AAGACTTGGG CGTATTGGTA TAGCGTACTC GGCTATGGGA TATTTATCCC TGTTGAGGTG
TATTATCTGA TTGTGCGCCC CTTTGACTGG ATCAAGCTTG GGGTGTTGCT GCTCAACGTG
GTGGTGGTCA TCGTAGTATA TAAGCAGATG CGCCGCAAAG GCCTCCTGTA A
 
Protein sequence
MTESPQVSGS IKAVTLYEVV KGVGAVLAAL ALWAWHSDVT DFISLANTAW VERFGTLFSV 
QVAALTQAAH QASQNWHIFT LIILGYASLR FIEAYGLWKD KTWAYWYSVL GYGIFIPVEV
YYLIVRPFDW IKLGVLLLNV VVVIVVYKQM RRKGLL