| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1849 |
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| Symbol | |
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| ID | 5205861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2301746 |
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| End bp | 2302738 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640600080 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001280739 |
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| Protein GI | 148653646 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000022678 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAAAAT CACCCTTAAT CTCCCGCCTG CCCTTTATCT CGATTTGGGC CGACAGCGAT
GCTCAGCAGC GTACGGCGCT AAAGGGCGTG ATTTTGGCCA TTGTTTCAAA CTTATTATTC
GGCGTGCTTT ATTTTTATAG CAGTCTTTTG CAGCCATTAA CCGGCACTCA GGTATTTATC
TGGCGCATGC TGTCTATGTG GGTGGTGCTG GTTGGTTTTT TGGCAATAAC TGGCAGGCTC
AGCTTTCATA TCAATCGCTT GCGTGAGCTA AGCAGCTTTA AGCAGTGGCT GTGGCTACTA
TTACCCACAC CCATATTTTT TAGTCAGCTG TGGCTATTTA TGTGGGCACC GGTCAATGAT
CAAGGCGTGC AAGTGGCCAT GGGCTACTTT TTGTTTCCGC TAATGATGGT GGTGTTTGGT
TTTATTTTTT TTGGTGAGCG CTTAAGCCGG TTGCAGTGGT TGGCGGTATT GTTTGCCATG
CTGGGTATTG GCCTTGAAAT GCTACGTACC CAAAGTGTGT CTTGGGCCAC GCTATGGGTG
TGCGGCACCT ACCCTATTTA CTACATCCTG CGCCGCTTGC AGGGCATAAC GGCGATGACG
GGGATGCTGG TCGATTTGAG TTTATTTTTG CCCATTGCAA TAGGCTATCT GGTAATAGCA
GCGCCTGGTA ACTTTATGTT TGTGACCGGA TCTGGGCTGT ATTTTATGTT GGTTGCAAGC
TTAGGTGTAA TTAGCGTATT GGCCTTAAAG ACCAATATTG ATGCCAGCCA AATACTGCCA
GTCAATGTGT TTGGTATGAT GAGTTACCTA GAGCCTTTAG TGCTGTTTGT ATTGGCAATT
ACCGTGCTCG GTGATAGCTT TGAGACCAGT ATGCTCTATA GCTATGGCTT TATTTGGCTG
GGCATTATGT TCTTGATTGC TCATGGTATA CAACAAATAC GCGCCAATAG ACGCAGCCCC
AAACCTTGGC AAAAAGGGGC TCGGGTCAGT TAG
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| Protein sequence | MSKSPLISRL PFISIWADSD AQQRTALKGV ILAIVSNLLF GVLYFYSSLL QPLTGTQVFI
WRMLSMWVVL VGFLAITGRL SFHINRLREL SSFKQWLWLL LPTPIFFSQL WLFMWAPVND
QGVQVAMGYF LFPLMMVVFG FIFFGERLSR LQWLAVLFAM LGIGLEMLRT QSVSWATLWV
CGTYPIYYIL RRLQGITAMT GMLVDLSLFL PIAIGYLVIA APGNFMFVTG SGLYFMLVAS
LGVISVLALK TNIDASQILP VNVFGMMSYL EPLVLFVLAI TVLGDSFETS MLYSYGFIWL
GIMFLIAHGI QQIRANRRSP KPWQKGARVS
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