| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1834 |
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| Symbol | |
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| ID | 5205856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2278595 |
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| End bp | 2280685 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600063 |
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| Product | ABC transporter related |
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| Protein accession | YP_001280724 |
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| Protein GI | 148653631 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000402561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000113397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATGACAT CCCAGCTACC ACCCGCTGAC CCGACCTCAC ACGTGAGCAC ACCTAAGCCT
AAGCCAGGTG CTGTGCCTAT CATGCAGGTG TCCAATCTGA TACGTGAGTT TGCCGCCGGC
GAGCAAACCA TTCGCATCTT ACATGGCTTA GACCTGACCA TTTATCAAGG TGAGATGGTG
GCCATTATTG GTCAATCCGG CTCAGGCAAA TCGACCTTAA TGAATATCTT AGGCTGCTTA
GACAAAGCCA CTGCTGGCGA TTATCTTATC TTTGGTAAAT CAGTCAAACA GCTCGATGCC
GATGAACTGG CCAAACTACG CCGTGAGCAC TTTGGCTTTA TCTTTCAGCG CTATCATTTG
TTAGGCGATA TTGATGCCCG TGATAACGTG GCCGTGCCTG CAGTTTATGC CGGCATGGAC
AACCAAGTGC GTGCCCAACG TGCCGAGAAG CTGCTGACTG ATCTTGGCTT AGGCGATAAG
ATTCATAACC GCCCCAGTCA GCTTTCAGGT GGTCAGCAGC AGCGGGTTTC TGTGGCACGG
GCACTGATGA ACGGCGGGGA TATTATCCTA GCCGATGAGC CGACCGGTGC TCTCGACAGT
AAGTCAGGTA AAGATGTGCT GCAAATCTTA CGTGATTTAA ATGAGCAAGG TCATACCGTT
ATTATGGTGA CGCATGACCC CTCTATTGCG GATCAAGCTG AGCGGGTCAT TGAGTTAAAA
GATGGTCATA TTATTGCTGA TTATCGCAAT GAGCATTTTA ACCGCTCAAA GAGCATCGAT
AGCGATCACA CTCATAGCTC ACACAATCAA CCAAGCTTAT CTAATGCCTC AGCACAAAGC
TCATCTGAGC TGCATAAAAA ACAAAAAAGC CGTTTAGGCT CCTTTATCGA CCGTTTATCT
GAAGCCTTTA GAATGTCTGT ACTGGCCATG CGTGCCCATA AAATGCGCAC GTTATTGACC
ATGTTGGGTA TTATTATTGG TATTGCCTCT GTGGTATCTG TAGTCGGTCT AGGTCAAGGC
TCACAGCAGC AAATCTTATC CAACATTAGC TCTCTTGGTA CCAATACCAT TACTGTCATC
GATGGCTACC CCTATGGTGA CCCCAGACGG CGCTATAATG ATGATAATCT GACGCCCGAT
GATGCCAAGG CTGTGGCCAA TCAGCCTTAC GTGGTTAGTG TGAGCCCGCA GTTAGATGCC
AGCGCCAGTG TGCGCTATCG AAATATTCAA GAATCATCCA GCATCAGTGG TGTGGGTGAA
GACTATTTGG AAGTTACAGG CGAGAAGCTG GCACTTGGTC AAGGCTTCGA TGAACAAAGT
ATCGCGTTAC GTACCCAAGA CATTATTATC GATGACAATG CCAAAAAAAC CTTCTTTGCA
GATGTTGATA ATCCCATTGG TCAAGTGGTC CTCATTGGCA ATGTCCCAGG CCGAGTCATT
GGGGTACTTG AGCCTAATGA GGGCGGCTTT AGTCCCTCAA GTGACAGCCC AACGATTTAT
ATGCCTTATA CCACGATGAT GTCGCGTATC GTGGGTGGCG AACATATTGA CCGTTTTGTG
GTACTTATCG ACAATCAAAT CTCAACCAGT GCTGCCGAAT CTGCCATCTC AGATCTTATT
GAAGGTCGCC ATGGTGCCGA TGACTTTAGA ACCCGTAATT CAGACTCTAT CCGTCAGACC
ATTGAATCCA CCACCAACAC CATGACACTG CTCATCTCAT CTATTGCTAT TATCTCGTTA
GTGGTCGGTG GTATTGGCGT GATGAATATC ATGCTGGTGT CGGTGACTGA GCGTACCAAT
GAGATCGGCG TGCGCATGGC GGTAGGCGCC CGCCAAAGCG ATATCATGCA ACAGTTTTTG
ATTGAAGCGG TACTGGTGTG TGTGCTTGGC GGTGCGCTCG GGGTATTATT GGCCTTTATG
ATTGGTGAGG CGATTAACAG CTTAGGCTCA GACAGCTTTA GCGTCATATA CTCTCCAACC
TCTATTGTTG CCGCCTTTAT CTGCTCTACT CTTATTGGTG TGGTATTTGG CTTCTTACCA
GCACGCAATG CGGCCAAGCT TAACCCTGTG GAAGCTTTGT CACGTGATTA A
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| Protein sequence | MMTSQLPPAD PTSHVSTPKP KPGAVPIMQV SNLIREFAAG EQTIRILHGL DLTIYQGEMV
AIIGQSGSGK STLMNILGCL DKATAGDYLI FGKSVKQLDA DELAKLRREH FGFIFQRYHL
LGDIDARDNV AVPAVYAGMD NQVRAQRAEK LLTDLGLGDK IHNRPSQLSG GQQQRVSVAR
ALMNGGDIIL ADEPTGALDS KSGKDVLQIL RDLNEQGHTV IMVTHDPSIA DQAERVIELK
DGHIIADYRN EHFNRSKSID SDHTHSSHNQ PSLSNASAQS SSELHKKQKS RLGSFIDRLS
EAFRMSVLAM RAHKMRTLLT MLGIIIGIAS VVSVVGLGQG SQQQILSNIS SLGTNTITVI
DGYPYGDPRR RYNDDNLTPD DAKAVANQPY VVSVSPQLDA SASVRYRNIQ ESSSISGVGE
DYLEVTGEKL ALGQGFDEQS IALRTQDIII DDNAKKTFFA DVDNPIGQVV LIGNVPGRVI
GVLEPNEGGF SPSSDSPTIY MPYTTMMSRI VGGEHIDRFV VLIDNQISTS AAESAISDLI
EGRHGADDFR TRNSDSIRQT IESTTNTMTL LISSIAIISL VVGGIGVMNI MLVSVTERTN
EIGVRMAVGA RQSDIMQQFL IEAVLVCVLG GALGVLLAFM IGEAINSLGS DSFSVIYSPT
SIVAAFICST LIGVVFGFLP ARNAAKLNPV EALSRD
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