| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1825 |
|---|
| Symbol | |
|---|
| ID | 5204868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2266858 |
|---|
| End bp | 2268249 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640600054 |
|---|
| Product | magnesium transporter |
|---|
| Protein accession | YP_001280715 |
|---|
| Protein GI | 148653622 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | [TIGR00400] Mg2+ transporter (mgtE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000202182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000113397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGTC AAAGCGAGAA CCCCGTCAAA CAAGATACCC TACCAGAGAG CTATGATCGT
GCTGAAGATA AGCTGATTTA TCTACAGAGG CTGGTGGCAG ACAAAGATTT GTCTACCATG
GCTGAGTTCT TAAACGACCA GTCTGAGTAT GAAATTGCCA GTCTATTAGA ATCCTTCCCT
CACGACTCGC GCCAATTGAT TTGGGAGCAA GTGCCTGTTG ATCTTAAAGG CCAGGTACTG
GCTGAAGTGG TCGATGACAT TCGCCCCTCC TTGATGGAAA ACATGCAAGC AGAAGAAATT
GAGACGCTTG CTGAAGATCT AGATGCTCAA GACATTGCTG AGATTCTAGA TACCGTTGAT
GACAAGGTGC GCTCGGAGGT GATGTCTAAT CTTGATGAAG AAATTCGCCA GCAAGTCAGC
CAGCTAAATA CCTATGAAGA GTATGAAGTC GGTGACTATA TGGACCCCGA CACCATTCAG
ATTCAAGGCA ATATTACGCT TGAGGAAGTC CAAAACTGGC TGCGTCAAGA TGAGGATCTG
CTCGATGATG AAACCCAAGA ACTTATCGTG GTCGATGCCA GCCATCAGTT GTTAGGCTTA
TTAAGCTTGG TGGATTTAAT TAAATATCCG CAGCAATCTT TAGTTGAGCA GTGGATTGAT
CCAGCCATCA CCATCAATGA CCGAATGGAC ATTCAAGATG CTGCTGCAGT ATTTCGCTCC
TCAGATATCC GCTATGCACC CGTGGTTAAT AGCTTTGGTG AATTGGTCGG TCAGCTTAAT
GCCGAGGACA TCATGGAGAT TATTCAAGAT GATGTCGACA GCACCATGAA GCACTTAGCG
GGTGTGAGTG ATGACGAAGA GCTGTTTGCC CCTATTTTGC GTAGTGCCAA AAGCCGTAGC
GTTTGGTTGG GGATTAACTT ATTAACTGCG CTGCTTGCTG CTGCGGTGAT CGGGCAATTT
GAAGAAGTAT TGGCGCAAGT CGTTGCTTTG GCGGTATTGA TGCCGGTAGT GGCCAGTATG
GGCGGGATCT CTGGTAGCCA AACCCTCACT GTGGTTATCC GTGGCCTAGC CATGGGCCAA
ATCGGGGGCT CAAACCGCTT ATGGCTAATG AATAAAGAGC TGTGGGTGGG CGCTATTAAC
GGGGTGATTT GGGCGGTGAT TATGGCCGCT ATCGCTCAGC TTTGGTTCCA TGACCCTAAG
ATTAGCTTGG TTATCGGCTG CGCCATTGCC ATTAATATGA CTGCTGCCAA TGTAGCAGGG
ATTGGCATTC CACTATTTTT AAAGCGCTTA GATATTGACC CTGCGCTCTC AGCCTCAGTT
ATCTTAACCA CAGTCACTGA CATTGTCGGC TTTATGTCGT TCTTAGGACT GGCCAGCTTG
CTTATTTTAT AA
|
|---|
| Protein sequence | MTSQSENPVK QDTLPESYDR AEDKLIYLQR LVADKDLSTM AEFLNDQSEY EIASLLESFP
HDSRQLIWEQ VPVDLKGQVL AEVVDDIRPS LMENMQAEEI ETLAEDLDAQ DIAEILDTVD
DKVRSEVMSN LDEEIRQQVS QLNTYEEYEV GDYMDPDTIQ IQGNITLEEV QNWLRQDEDL
LDDETQELIV VDASHQLLGL LSLVDLIKYP QQSLVEQWID PAITINDRMD IQDAAAVFRS
SDIRYAPVVN SFGELVGQLN AEDIMEIIQD DVDSTMKHLA GVSDDEELFA PILRSAKSRS
VWLGINLLTA LLAAAVIGQF EEVLAQVVAL AVLMPVVASM GGISGSQTLT VVIRGLAMGQ
IGGSNRLWLM NKELWVGAIN GVIWAVIMAA IAQLWFHDPK ISLVIGCAIA INMTAANVAG
IGIPLFLKRL DIDPALSASV ILTTVTDIVG FMSFLGLASL LIL
|
|---|
| |