| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1824 |
|---|
| Symbol | |
|---|
| ID | 5204867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2264597 |
|---|
| End bp | 2266636 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640600053 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_001280714 |
|---|
| Protein GI | 148653621 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000550793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000134855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGC TTAACCCCAA ACAACAAGAG GCCATGACTT ATGTGTCCGG TCCCCTCCTC
GTTTTAGCGG GTGCAGGCTC AGGTAAAACA TCGGTTATTA CCCGAAAAAT TGCTTATCTC
ATCGAGCAGT GCAATATACC TGCTGAACGC ATTACTGCAG TGACCTTTAC CAATAAGGCT
GCGCGTGAAA TGAAGGCGCG TGTCACCTCA CTGATGCCAA AAGAGAAGAC CCGCGGTCTA
ACTGTGTCTA CGTTCCACCA ATTTGGGTTA CAGTTTTTGC GTTATGAGCT GCTGCACACG
CCTCTCAAAG GCAACTTCTC TATCATGGAT GCCGATGACA GTAAGCGGCT GCTGATGGAG
TTGATGATGC GTGATAACTT ATCGGGTGCT GAGAGTCGTG AATTGGTCGG CAAAGCAATT
AAGTTTATTT CGGACTGGAA GAATGATCTT ATTGAGCCGG ATAAAGCAAT GGAGACCCTC
GATGATCCTG AGGATATGAT TTTTGCCACG CTTTATGCCT TATATGAGCG CAATCTGCGG
GCTTATAATG CCGTTGATTT CGATGACTTG ATTGTGTTGC CAGCCAAAAT CTTACGTGAA
AACCCCCAGC TGCGCGACAA GTGGCAGAAC CGTATTAGAT ATCTGCTGGT GGATGAGTAT
CAAGATACCA ATACTGCTCA GTACGAATTG ATTAAATTGA TTGTCGGCCC AACTGGCAAG
TTTACTGTGG TGGGTGATGA TGACCAATCT ATTTATGCTT GGCGCGGCGC CCGTCCCGAG
AACATGGCGC TATTAAAAGA GGATTTCCCT AAGCTTAAAG TGATTAAGCT TGAGCAAAAC
TACCGCTCGA CCAACCGTAT TTTGAATGCT GCCAACACCG TCATTATGAA CAACGAGCAT
TTGTTTGAAA AAGCACTGTG GTCGGATAAA GGGCAAGGCG AGAAAATTCG TATTATTAAC
TGCCGCAACG ATGATGATGA ATCAGAGCGC GTGGCCAAAG AGATTATTAC TCACAAATTG
CGCCATGGTA ATGAATGGGA GCAGTATGCC GTCTTGTACC GCAGTAACTT TCAGGCACGT
ATGTTAGAGG CGCAGCTGCG TCAATTACAG ATCCCTTATA AGCTCTCAGG CGGCCAATCT
TTCTTCGCCC GTAGCGAGAT TAAAGATGTG ATGGGCTATT TGCGCCTTAT TTTAAACCCA
GAAGATGACA GTGCCTTTTT GCGCATTGTG AATACGCCCA AACGTGGTCT GGGCCCAGCC
ACACTAGAGA AGTTGGGACT GTTCTCTCAA GAGCACAGCA TCTCTTTATT GGCCTCTTGT
ACCCATGGCG GCTTATCACA TGTATTGCCC ATTAAGGCTT ATAGTACTTT AAAAGAGTTT
GGTGACTTTA TCGAGCACTA TACCCGTGAG CTGGATCAGC ACCCAGATCC GGTGCCTTTG
GTGCGTCAAA TGATTGATGA GACCGGTTAT ATTGACTTTG TGCGCAGCGA CTCAAAAACG
CCGCATCAGG AAAAAGGGCG CCTAGACAAT ATTGAAGTGC TCTACACCAG TATCCAAGCA
CTTATCAACC GTGCAGAAGA TGACGATGAC AAAACCATTG ATGCGGTAAT TCGCAAATTG
GTATTACTAG ACATGCTCGA GCAGCAGCAA GAAGAAGAGA ACACCAACAA GGTAAACCTC
ATGACCCTGC ATGCTGCCAA AGGGCTAGAG TTTGACTTCG TGTATATTAT GGGGCTTGAG
GAAGAGCTGC TGCCCCACCG CAACTCTATC ATTGCTGAGA CCATTGAGGA GGAGCGCCGC
TTGATGTACG TCGGCATCAC CCGTGCCCGC CGTGAGCTAA CCCTAACCTT GGCTGCGCAG
CGCCGTGGTG GTGGTCAAAT GCGCACTACG ACCCAAAGCC GCTTTTTAGA AGAGCTGCCT
GAGGAGCATT TAGACTGGCC CGCCAATGCC AAAAAGAAAA AGGCTGAGCG TGATCCTACT
GTGGTGGCCA ATGAGTATAT GTCTAATATT AAGGCGCTGC TAAAAAGAAA AAACCAATAG
|
|---|
| Protein sequence | MSKLNPKQQE AMTYVSGPLL VLAGAGSGKT SVITRKIAYL IEQCNIPAER ITAVTFTNKA
AREMKARVTS LMPKEKTRGL TVSTFHQFGL QFLRYELLHT PLKGNFSIMD ADDSKRLLME
LMMRDNLSGA ESRELVGKAI KFISDWKNDL IEPDKAMETL DDPEDMIFAT LYALYERNLR
AYNAVDFDDL IVLPAKILRE NPQLRDKWQN RIRYLLVDEY QDTNTAQYEL IKLIVGPTGK
FTVVGDDDQS IYAWRGARPE NMALLKEDFP KLKVIKLEQN YRSTNRILNA ANTVIMNNEH
LFEKALWSDK GQGEKIRIIN CRNDDDESER VAKEIITHKL RHGNEWEQYA VLYRSNFQAR
MLEAQLRQLQ IPYKLSGGQS FFARSEIKDV MGYLRLILNP EDDSAFLRIV NTPKRGLGPA
TLEKLGLFSQ EHSISLLASC THGGLSHVLP IKAYSTLKEF GDFIEHYTRE LDQHPDPVPL
VRQMIDETGY IDFVRSDSKT PHQEKGRLDN IEVLYTSIQA LINRAEDDDD KTIDAVIRKL
VLLDMLEQQQ EEENTNKVNL MTLHAAKGLE FDFVYIMGLE EELLPHRNSI IAETIEEERR
LMYVGITRAR RELTLTLAAQ RRGGGQMRTT TQSRFLEELP EEHLDWPANA KKKKAERDPT
VVANEYMSNI KALLKRKNQ
|
|---|
| |