Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1823 |
Symbol | |
ID | 5204866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2263579 |
End bp | 2264208 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640600052 |
Product | OmpW family protein |
Protein accession | YP_001280713 |
Protein GI | 148653620 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00219711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000160297 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTAAAC GTCAAGCATT ACTTTTAGCT GCCCTAGCTG CTACTTTAGG CATGAGCTCT GCAATGGCAG AAACAGCAGG CACTTGGACC GTGGGTGTGG GTGCAGCATA TGTAGATCCA GAAAGTAATA ATGGTACTCT TTTAAATGGT GCTCTTAAAA CTGAAGTAGA TACAGACGTA CGTCCAACCA TCACCGGTGA ATACTTTGTC GCCGATAACG TTGGTGTTGA GTTATTAGCT GCTATTCCGT TTCATCATGA TATCGATCTA AAAGCGGCAG ACGGTAGCGT CATTAAAGCC AAAACTCAGC AGTTACCACC CACGTTATCG CTACAGTATC ACTTTGATAA CTTGAACAGC AATGTTAAGC CTTTTATTGG TGTGGGTGCC AACTACACCA CCTTCTTTAA AGAAAGAATT AGTATGCCAA ACGCTGATTT AGAAATTAAA GACAGCTGGG GTGTGGCAGG TCATGTCGGT GTTGATTTTA AACTCAATCC TACTGATGCG GTACGTATCG ATGCCCGTTA TATTGATCTT GAGCCAGACG TAAAACTAAA CAATGATGAT ATCGGTAAAG TGAAGATCAA TCCATGGGTA TATGGCATCT CTTACGTACA ACGTTTCTAA
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Protein sequence | MIKRQALLLA ALAATLGMSS AMAETAGTWT VGVGAAYVDP ESNNGTLLNG ALKTEVDTDV RPTITGEYFV ADNVGVELLA AIPFHHDIDL KAADGSVIKA KTQQLPPTLS LQYHFDNLNS NVKPFIGVGA NYTTFFKERI SMPNADLEIK DSWGVAGHVG VDFKLNPTDA VRIDARYIDL EPDVKLNNDD IGKVKINPWV YGISYVQRF
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