| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1821 |
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| Symbol | |
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| ID | 5204864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2260943 |
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| End bp | 2262214 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600050 |
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| Product | muramoyltetrapeptide carboxypeptidase |
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| Protein accession | YP_001280711 |
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| Protein GI | 148653618 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.87713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000133837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAAA ACACGATTTT AGTCACTGTC GATCAATCTG TGCAACAGCA CACGGCCAAA
CGACTAAAAA AGCAAGCTGT GCAAGACCAA GCACAGATAC CTGCCAAGCT TAAAGCAGTG
GATACACACG CTAAATCTGT TCAGACAGCC CCTTTAAATC GCAGACGTTT TTTGGAAATG
ACCGCGCTGG GCGGCGTAGG GCTGTTCTCG TATCATGCTA AGGCTGCATT AACCCTGCCA
CAGGGAGCAC TAACAACACA GAGTTTGGAT ATAGAAGATA CATCGACACA AAACCCCTTA
AGCTGTATTA CCCCGACTAT TAGTACTCGA ATTTTTGCCA GTTCTAATAC AGGTGTGGAT
GAGGCCCGTA ATGTCTTGGG TTTACAGCGC TTGACTTGTG CTGGATTTGA TATCAAGAAT
CCTGAAGTAT TAAGGCGCAG GTATTTGCGG TTCGGCGGTA CAGACCAGCA GCGCATCAGC
GACTTACAGA ACATGGCCAC TGGCGCCATT GAAGTACCCA AACTGCTATT GGCAGCCCGA
GGCGGCTATG GGGCCATGCG TCTTTTGGAG CAGGTGAATT GGCAAAGCCT GGGTGATCAG
ATGCGTGAAA AAGGTACGAT TTTGGCAGGT TTTAGTGATG TGACCGCCGT GCAATGTGCA
CTGTTGGCTC AAGGCAAAAT GAGCAGCTTG GCGGCACCCA TGCTATATAG CGAGTTTGGC
AAAAAGCAGC CGGATGTGGT CAGTTGCCAA GGCTTTATTG ATGCCATTAC CCAGCCAAAG
CTCAAAATAA GTTTGCCGCA GCAAGACATT TCAATGCTAA AAACACCTAT GACAGGCACG
CTATGGGGCG GCAACTTAAG TGTGGTATCG GCGCTGGCAG GTAGCCCTTA TATACCTAAT
CCTGAAGGCG GAATTGTGTT TTTAGAAGAT GTGGGTGAGC AGCCCTATCA AGTAGAGCGT
ATGCTATATA GCTTATATTT ATCGGGTGCC TTTAAACGTC AGCAAGCTAT TGTGCTTGGC
GCCTTTAGTG GGACAGGGCA GGACAGTTAT GATGCCCGCT ATGACATGAG TTTGGTTGTT
AAACAGTTAA AACAGATAAC CCACTTACCT GTATTTACCG GCCTTCCATT TGGCCATGTG
GCTCGTAAAC AAAGCTTCCC ACTGGGCGCG CAATGCCAGT TAAGTGCCTC TGATACTGGT
ATTGAGCTTG AGTTTAGCGG CTACCCAACC ATAGCTGGTG AGTTGATTTA TCCTGAAGGA
TTATGGCGCT AG
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| Protein sequence | MNKNTILVTV DQSVQQHTAK RLKKQAVQDQ AQIPAKLKAV DTHAKSVQTA PLNRRRFLEM
TALGGVGLFS YHAKAALTLP QGALTTQSLD IEDTSTQNPL SCITPTISTR IFASSNTGVD
EARNVLGLQR LTCAGFDIKN PEVLRRRYLR FGGTDQQRIS DLQNMATGAI EVPKLLLAAR
GGYGAMRLLE QVNWQSLGDQ MREKGTILAG FSDVTAVQCA LLAQGKMSSL AAPMLYSEFG
KKQPDVVSCQ GFIDAITQPK LKISLPQQDI SMLKTPMTGT LWGGNLSVVS ALAGSPYIPN
PEGGIVFLED VGEQPYQVER MLYSLYLSGA FKRQQAIVLG AFSGTGQDSY DARYDMSLVV
KQLKQITHLP VFTGLPFGHV ARKQSFPLGA QCQLSASDTG IELEFSGYPT IAGELIYPEG
LWR
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