| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1811 |
|---|
| Symbol | |
|---|
| ID | 5206301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2247370 |
|---|
| End bp | 2248665 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640600038 |
|---|
| Product | ATP phosphoribosyltransferase regulatory subunit |
|---|
| Protein accession | YP_001280701 |
|---|
| Protein GI | 148653608 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.307219 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.24135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGACA GTTCTACAAC CTCCAATAAC GCTCAACGTC AATCTTCAGA TAAATTGTCC
CATGTGGCAG ACATCGATAA CATTTGGTTA TTACCAGATG GGGTCAGTGA TTTATTGTCT
GAAGAGGCAC AAAAACAAGA ATGGCTGCGT TACAAGTTAA CTCGGCTGTT GGTCAGCCGT
GGTTATGAGC TAATTTGTCC ACCTATGATT GAGTTTACCG AGTCCTTACT GGGTAACGCA
TCAGAGGACT TAAAGCGTCA AACCTTTAAA ATCATTGATC AGCTATCGGG CCGATTGATG
GGGGTGCGTG CTGATATTAC ACCGCAGATT TTGCGTATTG ATGCTCACTT AAATAAGATG
GGCAAAGCCA ATAAAATTGC CAGATACTGC TATGCCGGCC ACGTTATACG CACTTTACCA
GATGGTTTGT TTGGCTCACG TACACCGCTG CAATTAGGGG CAGAAATCTT TGGTAGTGAC
AGCTTAGATG CTGATATTGA GCTGATTGAT GTGCTGTATT GCCTCATTAA TAATCTCAAT
CTAAAAAAAC ACTTACACAT AGACATAGGA CATGTGGCTA TTTTTGCGCG TTTAAAAGAG
CTTGCTGGCT TGTCAGAAAA TGACGCTTCG GTACTGATGA ATTTATATGC CAATAAAGCT
CTGCCTGAAT TAAAGCAGGT CTGTGCTGAG CTGCCGATGG GCAATGACTT TTATCAATTG
GCCGTATATG GCCATGATAT GAATGCGCTT AAGCAGGCCT TATCACAGAC GGCAACGCAA
GATAAAGCGA TTATCAAGGC CGTGCAAGAA GTGCAGGCCA TGGTCGCTCA TATCAAGAAT
ACGTATCAAA GCAATGTCAG CGTAGACATC ACAGAGCTTG GATACCATTA TCACACTGGC
ATTGTTTTTA ATGCCTACTT TGAAAACGAG TCACAGGCGG TGGTACGTGG TGGTCGTTTT
AATGGTGAAG GCTTTGATGC TGCGAGTCAG GCGTCTACGG CTATTGCCGA AGAACTGCCC
TCACGTAGTG CCACGGGCTT TAGCTTAGAG GTGACCCGTT TGCAGCGCTT TATTAGCTTA
AATGAATCTA AGCTAGTTTT AGTAAGCTTC GCGGATATGC AAGGCGTGCG CAGTGATGAC
AATGAGAAGT TGGCAAACGA TTTAACGACC AAGATTGCAG AGTTACGTGA TCTAGGTCAC
CGAGTGGTGC GTCCTTTAAG CAGTGAAGAT GCTCCCAATA ATGTGACACA CAAACTAATT
TTAGAAGATG GTGAGTGGGT TTTACGGGCC GTATAA
|
|---|
| Protein sequence | MSDSSTTSNN AQRQSSDKLS HVADIDNIWL LPDGVSDLLS EEAQKQEWLR YKLTRLLVSR
GYELICPPMI EFTESLLGNA SEDLKRQTFK IIDQLSGRLM GVRADITPQI LRIDAHLNKM
GKANKIARYC YAGHVIRTLP DGLFGSRTPL QLGAEIFGSD SLDADIELID VLYCLINNLN
LKKHLHIDIG HVAIFARLKE LAGLSENDAS VLMNLYANKA LPELKQVCAE LPMGNDFYQL
AVYGHDMNAL KQALSQTATQ DKAIIKAVQE VQAMVAHIKN TYQSNVSVDI TELGYHYHTG
IVFNAYFENE SQAVVRGGRF NGEGFDAASQ ASTAIAEELP SRSATGFSLE VTRLQRFISL
NESKLVLVSF ADMQGVRSDD NEKLANDLTT KIAELRDLGH RVVRPLSSED APNNVTHKLI
LEDGEWVLRA V
|
|---|
| |