| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1805 |
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| Symbol | |
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| ID | 5204621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2239205 |
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| End bp | 2241013 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600030 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_001280695 |
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| Protein GI | 148653602 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.80823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTC AGACAATGAC AACAAAACAC AGCTTATGGT TAATCGATGA TGATCCTGCT
TTAAGACTTA TTTTAGAGGA CTCCTTTAGT GATGCCGGCT TGCAAGTGCA AGCTTTTAGC
AATGCCAAAG GGGCCTGGGC TAGGTTAAAT AGTGTATTAA ATGGCAGTGA GCCAGAAGAC
ATATTGCCTG ATGTGATACT AACTGACATT CGCATGCCGA TGATGGATGG GCTGTCTTTT
AGTCAGTGGA TGCACACCAA CTTCCCCAGC CTACCTGTCA TTATCATGAC GGCTCACTCA
GACTTAAAAT CCGCAGTTGA CAGCTATGAC ACCGGTGCTT TTGAATATCT GCCCAAGCCT
TTTGATTTAG ATCATGCAAT CTGTGTGGTT AAAAAAGCCA TTACCACCAA TCCGGCAGCG
GCCTTAGTAG ACAACGCCAT AGTGGCAGAA GACTCAGAGG TGCCAAGTGC TGCTTCAGAT
AAAAAAGAGG CTATGCAGCG CCCTAATACC ACGCCGTCAT CAGAGATAAA AAAACAACCT
GCTACCAAAA AAGGCTCCCC TGTAGCGACT AAAGCCTCAG CGGCAAGCGA ATCTACCCCT
ATCATCGGTC AATCCCCAGC AATGCAAACT GTGTTTCGTG CCATTGGCCG CTTGGCCTCC
TCGCCGATTA CTGTCTTAAT CACCGGGGAG TCAGGCACGG GCAAGGAGCT GGTGGCCGGT
GCGCTGCATC AAAACTCACC GCGTCAAAAA AAGCCCTTTA TTGCGCTTAA TATGGCCGCT
ATTCCGCACG AGTTAATAGA ATCTGAGCTG TTCGGTCATG AAAAAGGGGC ATTTACCGGA
GCCACCACCT TGCGACATGG CCGCTTTGAG CAGGCCAATG GTGGGACACT GTTTTTGGAC
GAAATCGGTG ACATGCCTTT TAGCACCCAG ACTCGGCTGC TGCGGGTCTT GGCCAATGGT
GAATTCTTTC GAGTGGGCGG TCAAAAGCCA ATTACTGTCG ATGTGCGCAT CATTGCCGCC
ACCCACCAAA ACCTTGAACA ATTGGTGAAA GAAGGCAAGT TTCGTGAAGA TTTATTTTAT
CGCTTAAATG TCATTCGACT GCCGCTACCG CCGCTACGAG CGCGCCCCGA TGACATACCT
GATTTGGTTG AGTTCTTTAT GAGCAAAGCG GCCACTGAGA TGAAAACCGA TAAAAAACAG
CTGACTACAG AGGCACTACA TATTATGCAA GCCTTTGATT GGCCAGGAAA TGTACGTCAA
CTTGAAAATG CTTGCCGCTG GATTACCGTG ATGGCCACAG GAGAGAGGCT CGGTGTGGAG
GATTTGCCTC CTGATTTAAC CGAGTTTGCA CAGCATTATC TGGCTCATGC CGCAAACCCT
GAAGCACTAG AGGGTCAAGG TATGCAAACT CTCAGCAACC TGCCAAATAA TAGCCCAGGT
TTTGCCGCAC CCAGCACCAC TGCATCTGCG GCGTCTTATA CACAAGGCAA TTCTCCAAGC
TTTGCGGCAA CCGCTCAGTC TGATGAGCAC CGACAAACCA GCACCGCTTC AGTCACCATC
ACACCGCCCG CCTTAGTGAA CAGCGCCCAT AGCTGGCAAG ATCAGCTACA AAATTGGGCC
CATACCGCTT TGCAGCAAGG ACAAACCGAA ATTTTGCAGC AGGCCACTCC CACATTTGAA
AAAATCTTGA TTCGCGTGGC GCTTGAATAC AGCAAAGGTC GAAAAGGTGA AGCTGCTGAC
CTACTCGGCT GGGGGCGCAA TACCTTAACT CGCAAGATAA AGCTGCTTGG GCTAGAAGGC
GATCAATAG
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| Protein sequence | METQTMTTKH SLWLIDDDPA LRLILEDSFS DAGLQVQAFS NAKGAWARLN SVLNGSEPED
ILPDVILTDI RMPMMDGLSF SQWMHTNFPS LPVIIMTAHS DLKSAVDSYD TGAFEYLPKP
FDLDHAICVV KKAITTNPAA ALVDNAIVAE DSEVPSAASD KKEAMQRPNT TPSSEIKKQP
ATKKGSPVAT KASAASESTP IIGQSPAMQT VFRAIGRLAS SPITVLITGE SGTGKELVAG
ALHQNSPRQK KPFIALNMAA IPHELIESEL FGHEKGAFTG ATTLRHGRFE QANGGTLFLD
EIGDMPFSTQ TRLLRVLANG EFFRVGGQKP ITVDVRIIAA THQNLEQLVK EGKFREDLFY
RLNVIRLPLP PLRARPDDIP DLVEFFMSKA ATEMKTDKKQ LTTEALHIMQ AFDWPGNVRQ
LENACRWITV MATGERLGVE DLPPDLTEFA QHYLAHAANP EALEGQGMQT LSNLPNNSPG
FAAPSTTASA ASYTQGNSPS FAATAQSDEH RQTSTASVTI TPPALVNSAH SWQDQLQNWA
HTALQQGQTE ILQQATPTFE KILIRVALEY SKGRKGEAAD LLGWGRNTLT RKIKLLGLEG
DQ
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