Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1804 |
Symbol | |
ID | 5204620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2237914 |
End bp | 2239113 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600029 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_001280694 |
Protein GI | 148653601 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCT CAAATACCCT TTTATTACTG CAAAACCTCT ATACCGGTGT GCTCTGGGTC GCTGATGATC TGACTATCGA ATGGGTAAAT GGCCAAATCG AGCAGTTGTT ATCGGTCAGT AAAACCCGTC TTATCGGGCT TAATGTACTG CAGCTACTGA TGCCCAGTGC CAACGAAAGT GGTGCAGAGC TGAGTGTAGC GGAATTAGCA GAGGCTCAAG ACAAGCTGCG TACCCAGTTT CACAATGCTT GTGATTATCG CCAGCCTTTT ATTGAATACA GCCGTCATAT TCGAGGCGTT ATTTATCCTT TATATGTGCA TTATAGCGTG ACGCCTATCG AGCAAGAGGA TCGCGTTTAT TTTTTGATTG AGATATGGCA AGGCGATCGC CAAAGCCGGC TAGATAAAGA GCAGCGGCTA CAAGAGCAGC ACGATGTATC TCGTGAAATG CTACGCTCAG TGGCGCACGA GGTCAAAAAC CCATTGGCGG GTATTCGCGG GGCAGCGCAG CTGTTAATTA AGCAAACTCA GCATACTAAA TTGCCCTCAG ATCAGTTAGG CGAGATGACG CAAGTGGATG CCAAAAAACT GACCACTTAT GCCAATATTG TCATCAGCGA AACCGATCGG CTCACCCAGC TTATTGAACA GCTCTTGGGC TCCAATCAAT TGCCTGATTT GCAGCAAATA AATATCCACG AGCCGCTAGA GCATGTGCTG CTATTAACAC AGACTCAGTA TCCTAAAGTC AGCATCCAGA GGGATTATGA CTTATCGCTA CCGGAGCTTA CCGCTGATAA AAACCAGCTG ATTCAAGTAT TTTTGAACTT AGTTAACAAT GCGTGTGAGG CGATGCTTGA GCAAGACACC AGTCTGCTTG CTGCTGACTA TCAGCCACAG CTTAAAGTTA CCACCCGCAT TGAGCATCAA TACACCATTG GCACAGTGCA TCATCGTCAA GTGATTAAAG TGAGTATTGA AGACAATGGC GCCGGCATTG ATAGCGACTT AATTGGTCGC ATATTTTTTC CTTTAGTGAC GGGGCGTGCT AATGGTACGG GGCTTGGATT GGCCTTAGTA CAAGAGATTT TGCATAGTCA TGAGGGCGCT ATTGAGGTGC ATTCACAGCC CGGGGATACC CAGTTTAATA TTTATTTGCC GCTGCAATTA ACACCGAAGG CGGCGCCGGA TGCTCACTGA
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Protein sequence | MTPSNTLLLL QNLYTGVLWV ADDLTIEWVN GQIEQLLSVS KTRLIGLNVL QLLMPSANES GAELSVAELA EAQDKLRTQF HNACDYRQPF IEYSRHIRGV IYPLYVHYSV TPIEQEDRVY FLIEIWQGDR QSRLDKEQRL QEQHDVSREM LRSVAHEVKN PLAGIRGAAQ LLIKQTQHTK LPSDQLGEMT QVDAKKLTTY ANIVISETDR LTQLIEQLLG SNQLPDLQQI NIHEPLEHVL LLTQTQYPKV SIQRDYDLSL PELTADKNQL IQVFLNLVNN ACEAMLEQDT SLLAADYQPQ LKVTTRIEHQ YTIGTVHHRQ VIKVSIEDNG AGIDSDLIGR IFFPLVTGRA NGTGLGLALV QEILHSHEGA IEVHSQPGDT QFNIYLPLQL TPKAAPDAH
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