| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1796 |
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| Symbol | |
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| ID | 5205063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2226757 |
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| End bp | 2229213 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640600021 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001280686 |
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| Protein GI | 148653593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00389709 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGT CTTTATTTAA AATGTCTCAA CTAATAGCAG TCCCTGCCTT TGCAGCAATA
ATGGCTGTTT CTGCTCAAGC TGCGGATACG GTAATCACCG ATATCCAATT TGAGGGCTTA
CAGCGTTTAA CACCTGAGAG CTTATATCCT CTGCTCAATA CCAATGTAGG CGACACAATT
AGTGACCAAG ATTTGGCGCA AAGCATTGAA GCTTTATATG CCACAGGTGA CTTTGCTAAC
ATTCAAGCAA AAACAGAAAA TGGCCGCTTA ACCTATTATG TGGTAGAGCG TCCTATCGTT
GCTGAAATTA ATTTTGAGGG TAACAAGCTT ATCCCAAAAC AAGGCTTAGA AGATGGTCTA
AAATACGCCG GCATCGCAGT GGGTGAGGTA TTAAAGCAGT CCACAGTACA AAACGTAGCC
AACGAACTAC AGCAGCAGTA TATCGGTCAA GGCTATTACA ACAGTGATAT CGAAGTTGAT
CAGCAGCTAT TAGATGGCAA CCGCGTAAAA TTGACTGTGC GCTTTATCGA AGGTAAAGCG
GCCAAAGTGG TTGATATTAA CGTGATTGGT AATAAATACT TTAGCGATGA AGACATCAAA
GATGTGTTTG CGGTAAAAGA GTCCTCATGG ACGCGTATGC TGTCGAAATC AGACCGTTAT
GCCAAAGAAA AGCTGGCAGC AAGCTTAGAG AACCTCAAAG CCATGTATAT GAACGAAGGC
TTTGTTAACT TTAGCGTAGA TAATGCCATT TTAAACATCA ATGAAAGCAA AGATAAAGTT
TTTATTGAAG TCAGTTTGAC AGAAGGTGAG CAGTATAAAT TTGGTCAAGC TAACTTTTTA
GGTAACCCCA CTTACAGCAA AGATCAATTA GACGATAAGA TTGCCTTTAA ACCCGGAGAG
CAGTTTTCAC AAGCCAAGCT TGAGCAGTCA ACCACAGCCT TAAAGAACTA TTATGGCGAT
GATGGCTACT ATTTTGCCCA AATTCGACCC ATTACCCGTA TTAACGACGA AACAAAAACC
GTTGATATTG ATTACTTCAT TGATCCGGCC CGTCCTGTGT ACGTTCGCCG TATTAACTTC
AACGGCAATA TTAAGACCCA AGATGAAGTG CTGCGCCGTG AAATGCGTCA GTTAGAGGGC
AGCTTAGCCT CGAGCGAAAA AATTCAAAGC TCAAGAGTGC GCTTGATGCG TACCGGCTTC
TTTAAAGGCG TCAATGTGGA TGTCAAACCT GTGCCTAACA GCCCTGATCA AGTGGACGTC
AACTTCGTGG TAGAAGAGCA GCCTTCTGGT AGCTCAACCA TCGCCGCCGG TTACTCACAA
AGTGGCGGTG TGACCTTCCA GCTAGACTTC AGTCAGCGTA ACTTTATGGG TACAGGTAAC
CGAGTAAATG CTGCCTTATC ACGCTCACAG ACGCGCGACT CATATAGCTT AGGTTTTACT
GACCCGTACT TCACTGAGAA CGGGGTGTCT CAAGGGGTGA GCGGCTATTA TAGAAAGACC
AAATATGATG ATCGCAACGT CAGTAACTAT GTGACAGACT CTTACGGTGG TACGTTAAAC
TACAGCTATC CTATTGATGA AACCAAGCGC ATTAGTGCAG GCTTCAACTA TGACAATACG
GAAGTTCGTG GTGGCCGCTT TATGGGTATC TCCAATGCCT ATGACTTGTT AAAAGAGGGC
GGTGAAGCTA AGTCTTATAG CGCCGATAGC GAATCTAATA CATCAGGTAC CAACTTTAAG
AATGACTATA ACACCTATAG TTTATTGTTA GGCTGGGACT ATAGCACCTT AGACAGACCT
GTGTTCCCGA CGAAGGGTAT GAACCACACC GTGAACCTAG ATTTAGGCTT TGGTGATCAA
ACCTACCAAA AAATCGTCTA TAAAGGTAAC GTTTACTACC CGCTGGCCAA AGACTTCGTC
GCCCGTGGTT ATGCAAAGCT GGGCTACGGT AACGACTTGC CGTTTTATGA GAACTTCTAC
GCAGGGGGCT ATGGCTCAGT GCGCGGTTAT GAGTCTTCAA GCTTAGGTCC ACGCTCTCCT
TACTTTGCAC AAATGGATCG TTATGAGCAA GATTTAGAGA CCTTTGGTAA AGGGTATGGC
GAAGAGGTGG GTGGTAATGC GCTGGCGACT GTGGGTGCTG AGCTGATTTT GCCGATGCCA
TTTAAGGGCG ACTGGGCAGA CCAAGTGCGT CCGGTGCTCT TCGTTGAGGG TGGTCAAGTA
TTTGATACCA CTGACAAAGA AGACAAAAAA GTTAAGTTTG TGGATGGCAA ATTTGAAGAG
TCTGCAGATG GCGTACCACT GCTAAGACAA GATAACTCTA TGCGTTATAG TGCCGGTGCT
GGTGTGACTT GGTACACGCC TATTGGTCCC ATCTCTTTAA GCTATGCCAA ACCTTTTGGT
GATAAAGAGG GCGACAAAAC AGAAGAAGTC CAATTCCAGA TTGGTAGTAC TTTCTAA
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| Protein sequence | MQTSLFKMSQ LIAVPAFAAI MAVSAQAADT VITDIQFEGL QRLTPESLYP LLNTNVGDTI
SDQDLAQSIE ALYATGDFAN IQAKTENGRL TYYVVERPIV AEINFEGNKL IPKQGLEDGL
KYAGIAVGEV LKQSTVQNVA NELQQQYIGQ GYYNSDIEVD QQLLDGNRVK LTVRFIEGKA
AKVVDINVIG NKYFSDEDIK DVFAVKESSW TRMLSKSDRY AKEKLAASLE NLKAMYMNEG
FVNFSVDNAI LNINESKDKV FIEVSLTEGE QYKFGQANFL GNPTYSKDQL DDKIAFKPGE
QFSQAKLEQS TTALKNYYGD DGYYFAQIRP ITRINDETKT VDIDYFIDPA RPVYVRRINF
NGNIKTQDEV LRREMRQLEG SLASSEKIQS SRVRLMRTGF FKGVNVDVKP VPNSPDQVDV
NFVVEEQPSG SSTIAAGYSQ SGGVTFQLDF SQRNFMGTGN RVNAALSRSQ TRDSYSLGFT
DPYFTENGVS QGVSGYYRKT KYDDRNVSNY VTDSYGGTLN YSYPIDETKR ISAGFNYDNT
EVRGGRFMGI SNAYDLLKEG GEAKSYSADS ESNTSGTNFK NDYNTYSLLL GWDYSTLDRP
VFPTKGMNHT VNLDLGFGDQ TYQKIVYKGN VYYPLAKDFV ARGYAKLGYG NDLPFYENFY
AGGYGSVRGY ESSSLGPRSP YFAQMDRYEQ DLETFGKGYG EEVGGNALAT VGAELILPMP
FKGDWADQVR PVLFVEGGQV FDTTDKEDKK VKFVDGKFEE SADGVPLLRQ DNSMRYSAGA
GVTWYTPIGP ISLSYAKPFG DKEGDKTEEV QFQIGSTF
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