Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1794 |
Symbol | fabZ |
ID | 5205061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2224930 |
End bp | 2225487 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640600019 |
Product | (3R)-hydroxymyristoyl-ACP dehydratase |
Protein accession | YP_001280684 |
Protein GI | 148653591 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000178488 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATTA ACTGTGACAC GATAACCCCA ACGGCAGCGG CCACCACTCA AAATGAGTGG CAAATGACTG CAGAAGACCA CCAAGCTTTA GCCGACCAAG GGGTCAGCTT ACCGCTACGA TTCGAGGCGC TAAAACGCTA CTTACCACAT AGATACCCTT TTATGTTGGT CGATAGAGTC ACCGATTGTA GCTCTGGTCA GTGGATAAGC GGCTATAAAA ATGTCACTAT TAACGAGCCA TTTTTTCAAG GGCACTTCCC TGAGCAGCCT ATTATGCCTG GGGTGTTAAT TGTTGAAGCC TTAGCACAAG TCTCTGGTGT CTTGGCGTTT ATTAGCCGTG GTATCTCTGC TGCAGATGGT CATTTGTTTT TATTTGCAGG TGTTGATAAA GTGCGATTTA GATGCCCTGT GGTGCCCGGT GACAAGCTGA TATTAAAATC TAGGCTATTG ACTCAAAAGC GTGATGTGTA TAAGTTTGAA TGTAAAGCTT ATGTTGAGGA TACGCTAGCG GCCAGTGCTG AGCTGATGAT TATGCGTCAA GACAGTCGCT CAAAATAG
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Protein sequence | MTINCDTITP TAAATTQNEW QMTAEDHQAL ADQGVSLPLR FEALKRYLPH RYPFMLVDRV TDCSSGQWIS GYKNVTINEP FFQGHFPEQP IMPGVLIVEA LAQVSGVLAF ISRGISAADG HLFLFAGVDK VRFRCPVVPG DKLILKSRLL TQKRDVYKFE CKAYVEDTLA ASAELMIMRQ DSRSK
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