Gene PsycPRwf_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1789 
Symbol 
ID5205715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2217961 
End bp2219151 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content46% 
IMG OID640600014 
Productglycosyl transferase, group 1 
Protein accessionYP_001280679 
Protein GI148653586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA TGCGCCTGCT CTCTTCTTTA AAGCACGATG AATCCGAACG AGGGATTTTT 
CATCTTGGCC GCGCCTTGGT AAAACGGGGA CACACCTCGA TTATTATCTC CTCAGCTGAC
AAAGAGCACG ACTTGGTCAA GCGCCTTGAG CGTGATGGTA ACATCTATAA TCAGCTGTCT
TTAGAAAAGA AGTCTTGGCT GGCGCTACGC CAAGTGCTGC CGCTTCGCAG GCTTATTGAG
AAGCATCAGC CGGATATTAT TCATATCCAT TCACGCACGC CGGCTTGGAT ATTGCATTGG
GCATTAAAAG GTGCCAAGGT TAAGCGAAAA CCTAAGCTTG TGGCGACCAT GTATGGCTTT
TATCCACTTA ATAATTACTC GCGCGCGCTG CTTAATGTCG ACCGTTTAAT TACCGTCTCT
GATAGCGTCA GTGATTATCT GATGCAGGGA CTCAAAGAGC TAAAAAACCC ACCCCGCTCT
ATTACTCGTA TCTATCGAGG CGTCGATACC CGCAGCTTTC CTTACCGTTA CAACCCTTCT
GTGTACTGGC TACGCCGCAC TTTTGCTGAA TATCCTGAGC TTGAGCACAA AAAGTGGCTA
CTGTTTCCCA CCATCATAGG GCAAGAGTAT GGACAAGAGT GGCTGATAGA TGTGGTGGGT
AATTTGGGTG AGGCTTTTCC CAATATTCAT ATTATTATTA TGGATGATGA GTCGCGTCAT
GGTGTGGTGC ACGATGAATT TTTACAGCGG GTTAATGCGT TAGAGCTTCA AGATAAGTTC
ACCTTCATTG GCTCTAAACG CAATGACATG CGTGAGTGGC TGGCAGCGGC CAACTTAGTG
CTGGGCCTTG CCAATCAACC TGAATCTATT GGTATTAATA TCTTACAAGC TATTCACTTA
GGCACGCCTG TGGTGGGCTG GAACAAAGCT GCTTTTAATG AGATTTTGCG TCCTTTATAC
CCGCAAGGTT TGGTCAAAGA AAATACAGCC TACGCACTGT GTAAAGTTAT TCGCAGCCAA
TTAGAGAATG TGATGCGCCC CTCTATCACA GATAAATTCA CCATGCAGCA AATGATTGAT
GAGACTTTAG AGGTGTATAG CACGTTATAT GATGCCAACC AGCTCAGCTA CAGTGATACG
TTTATTGAAA AAAAGCGGCT GAAAAAAAAG GCGCAGCAAA ACTTACGATG A
 
Protein sequence
MKVMRLLSSL KHDESERGIF HLGRALVKRG HTSIIISSAD KEHDLVKRLE RDGNIYNQLS 
LEKKSWLALR QVLPLRRLIE KHQPDIIHIH SRTPAWILHW ALKGAKVKRK PKLVATMYGF
YPLNNYSRAL LNVDRLITVS DSVSDYLMQG LKELKNPPRS ITRIYRGVDT RSFPYRYNPS
VYWLRRTFAE YPELEHKKWL LFPTIIGQEY GQEWLIDVVG NLGEAFPNIH IIIMDDESRH
GVVHDEFLQR VNALELQDKF TFIGSKRNDM REWLAAANLV LGLANQPESI GINILQAIHL
GTPVVGWNKA AFNEILRPLY PQGLVKENTA YALCKVIRSQ LENVMRPSIT DKFTMQQMID
ETLEVYSTLY DANQLSYSDT FIEKKRLKKK AQQNLR