| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1768 |
|---|
| Symbol | |
|---|
| ID | 5205800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2188141 |
|---|
| End bp | 2188635 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640599993 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001280658 |
|---|
| Protein GI | 148653565 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC CCACTGACGA AATGATTACC CTACCTAACT TCCCAATGCC TATGGTACAA
AGCATAGATG ATGACATGGT AGAGAGCGAA ATAGTACTTG ATCAGTTTGT TGAGAATATG
GACAAAGGCT TAATTATTTA CTTCTATCCA CGTGATAATA CGCCCGGATG TACCACTCAG
GCGACTGACT TTACCGCCAA GCTTAGTGAA TTTGATGCGC TTGGCTACGA GGTTATCGGG
GTGTCTAGAG ACAGTATTGA ATCGCATAAG AAATTTATCG AAAAACACCA TCTTCAAATT
GCGCTCATCA GTGATACAGA TGAAAAGCTT TGCCAGCACT TCGATGTGAT TAAAGAAAAA
AATATGTATG GCAAAAAAAC TCTAGGCCTG GTGCGCTCTG CTTTTGTGTT TGATAAAAAT
GGCACACTGA CCCACGCTCA GCGTAATTTG CGTGCCAAGG ACTATGCCGA TAGACTTCTT
GACACCTTAT CGTAA
|
|---|
| Protein sequence | MAKPTDEMIT LPNFPMPMVQ SIDDDMVESE IVLDQFVENM DKGLIIYFYP RDNTPGCTTQ
ATDFTAKLSE FDALGYEVIG VSRDSIESHK KFIEKHHLQI ALISDTDEKL CQHFDVIKEK
NMYGKKTLGL VRSAFVFDKN GTLTHAQRNL RAKDYADRLL DTLS
|
|---|
| |