Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1761 |
Symbol | |
ID | 5205793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2180373 |
End bp | 2182223 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599986 |
Product | potassium efflux system protein |
Protein accession | YP_001280651 |
Protein GI | 148653558 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00639423 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGCAG CCTCCCTTGT TCAACCCAGT CTCATGTTAC AAGCGACCAT CTTTTTAGGT GCCGCCTTGT TATTGGTACC TTTGGGCAAG CGGCTGCATA TCTCAACTGT ACTGGGTTAT CTGATTACTG GCTTGCTGCT GGGTCCGAGT GTGTTTGATG TGGCCGGTGA TGCCGAAAGT TTAATGCACT TTTCTGAGTT TGGGGTGGTC ATGCTGTTGT TCGTCATCGG ACTTGAGCTG CAGCCCTCAC GGCTTTGGGC GCTGCGTCAC TCGATTTTTG TATTCGGGGG CTTGCAAGTT GGGGTGACAG GCTTATTGTT AATGGGGCTG CTGTATGAAT TTAGCAGCTT AAAATTAGAC ACCGCCTTTA TTGTCGGCTT TGGTCTGGCG TTGTCTTCTA CTGCCTTTGT GCTACAAGTA TTGACCGAAA AGGAGCAACT GTCGAGCACC CATGGCCGCG AAGCCTTTAC CATCTTATTG TTCCAAGACA TCGCGGTTAT TCCTCTGCTG GCTGCCATTC CCTTCTTATC TGGGGTGCGT GAGCAGACTT ATGACTTAAT TTATTTTGGT AAAGTGGTGG CAGTGTTTGG CGGCTTATTC TTAGTCAGCC GTTATGTTGT ACGCCCTTTT TTCAAGTTCG TGGCCTTAAG TGGTGCTAAT GAGCTGCTGA CCGCCGTGGC GCTATTTATT GTCATGGGCG TGTCTATTTT GATGGGGCAG ATTGGCTTAT CTATGGCATT GGGTGCTTTT TTGACCGGTG TACTACTGGC CGACTCTGAA TACCGCCATG AGCTTGAAGC CAGTATTGAG CCCTTTAAAG GCTTGCTGCT GGGTCTATTT TTTATGTCCG TTGGTATGCT CACCGACGTC AAACTTATCT TGGCGCACCC CGCTTTTATC ATTGGCGCAG CCATTGCCTT AATGGTGATT AAATTTGGGG TGATTACCAT TATTGCCCGC TTATTAGGCA ACCGCTTACC AACCAGTATT CGTCTGGGGG TGACTTTGGC TCAAGGCGGT GAGTTTGCTT TTGTGTTATT TAGCACGGCG GCCAATTCAA ACGTACTGCG TCCAGAGCAT GCCAATCTAC TGACTTTGAT TGTGACCATC TCTATGGCAC TGACCCCTAT TGGATTTATG CTGCTTGAAA AATTCGGTGA GCCCAGATTT GATAAAGGTC AGCCAGACCG TGAATATGAC AGCATCCCTG ACCATGAGCA TCCGGTAATT ATCGCAGGCT TTGGCCGTGT CGGACAAATT ATCGGCCGCG TACTGCGCAT GCATAATATC GAATTTACCG CCATTGAAAG CTCAGCCAAC CAAGTGGATT TCGTGCGTAA GTTTGGTAAC CAAGTTTATT ATGGTAACCC GCAAAATCCG CAAATCTTGC GTACTGCCGG TATTGAGAAG GCACGCCTGT TTATCATCGC CATTGATGAT ATCGAGCGCT CTATTGCCAC TGCCCGCTAC TTGCATACCA ATTATCCGCA TCTTCAAATC CTAGTACGTG CGCGTAACCG GGCCCATTTT TACCGTTTGC GAGAGATTGG TATTACTCAC ATTTGGCGCG AAACCTACTT ATCCTCGCTA GATATGTCAC GTGAGTCGCT TGAGCTGCTT GGTATTTCTC CTCAAAAAGC GCGCGAGACC ATCACCGCCT TTCGTGATTA TGATGACAAA CTGTTGGCAC AGCAGCAGGC CATTTATGAA GATGAGGCCA AGATGATTGC CTCGGTACAG TCCTCTATGA TGGAGCTTGA AAGCTTATTT GATTCTGATC ATTCAGAGGG CAAAAAGCTG GACTTAAATG AAATAGAAAC CGCAGTGGGC ATTCATAAAT CCAGCTCTTA G
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Protein sequence | MIAASLVQPS LMLQATIFLG AALLLVPLGK RLHISTVLGY LITGLLLGPS VFDVAGDAES LMHFSEFGVV MLLFVIGLEL QPSRLWALRH SIFVFGGLQV GVTGLLLMGL LYEFSSLKLD TAFIVGFGLA LSSTAFVLQV LTEKEQLSST HGREAFTILL FQDIAVIPLL AAIPFLSGVR EQTYDLIYFG KVVAVFGGLF LVSRYVVRPF FKFVALSGAN ELLTAVALFI VMGVSILMGQ IGLSMALGAF LTGVLLADSE YRHELEASIE PFKGLLLGLF FMSVGMLTDV KLILAHPAFI IGAAIALMVI KFGVITIIAR LLGNRLPTSI RLGVTLAQGG EFAFVLFSTA ANSNVLRPEH ANLLTLIVTI SMALTPIGFM LLEKFGEPRF DKGQPDREYD SIPDHEHPVI IAGFGRVGQI IGRVLRMHNI EFTAIESSAN QVDFVRKFGN QVYYGNPQNP QILRTAGIEK ARLFIIAIDD IERSIATARY LHTNYPHLQI LVRARNRAHF YRLREIGITH IWRETYLSSL DMSRESLELL GISPQKARET ITAFRDYDDK LLAQQQAIYE DEAKMIASVQ SSMMELESLF DSDHSEGKKL DLNEIETAVG IHKSSS
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