| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1739 |
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| Symbol | |
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| ID | 5206006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2152551 |
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| End bp | 2153237 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599964 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001280629 |
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| Protein GI | 148653536 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.221594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAA TTTTAGTCGC AAAAGATATT AATAAAATCT ACGATGAGGG CAATATCCGC
ACTCAGGTGT TGACCGGGCT TAATTTAACC GTTAAAGCCG GTGAGCGCAT TGCCATTGTA
GGTACCAGTG GCTCAGGCAA AAGTACGTTG CTGCATTTAT TGGGCGGGCT TGATGTACCA
AGCTCAGGTG AAGTATGGCT ACATGGTCAG TGTTTAAATA ATATGAACGA AACTGAGCGC
GGTGAGATGC GCAATAAGCA CTTAGGTTTT ATTTATCAGT TTCACCATCT GTTGCCCGAA
TTTACCGCTA TTGAGAACGT GGCCATGCCG CTATTGCTAC GTAAAGAGGT GCCTATTAAA
GAGGCGCGCC AGCAGGCCGT GGACTTGCTT GAGCGAGTGG GGCTTGGGCA CAGATTAGAG
CATCGCCCTG GTGAGTTGTC TGGCGGGGAG CGTCAGCGGG TAGCCATTGC TCGAGCCTTG
GTCACCAAGC CCTCGCTCGT CTTAGCGGAT GAGCCGACAG GTAACTTAGA TTATGACAAT
GCCCAAAGTA TCTTTGCGCT GTTGGCTGAG CTTCAAGACA CCATGAAAAC GGCGCTCCTT
ATGGTCACTC ATGACAGAAA TCTGGCGGCC ATGGCCGATC GTCAAATGCT GCTAAAAAAC
GGTAAGTGGG AAGCGTTTTC GGATTAG
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| Protein sequence | MSEILVAKDI NKIYDEGNIR TQVLTGLNLT VKAGERIAIV GTSGSGKSTL LHLLGGLDVP
SSGEVWLHGQ CLNNMNETER GEMRNKHLGF IYQFHHLLPE FTAIENVAMP LLLRKEVPIK
EARQQAVDLL ERVGLGHRLE HRPGELSGGE RQRVAIARAL VTKPSLVLAD EPTGNLDYDN
AQSIFALLAE LQDTMKTALL MVTHDRNLAA MADRQMLLKN GKWEAFSD
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